RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 C2CD4AQ8NCU7 369 aaPredicted RBP18.68■□□□□ 0.58
PRKCH-219ENST00000555906 OR9A4Q8NGU2 314 aa18.68■□□□□ 0.58
PRKCH-219ENST00000555906 MAGEB10Q96LZ2 347 aaPredicted RBP18.68■□□□□ 0.58
PRKCH-219ENST00000555906 CCDC138Q96M89 665 aa18.68■□□□□ 0.58
PRKCH-219ENST00000555906 VN1R1Q9GZP7 353 aa18.68■□□□□ 0.58
PRKCH-219ENST00000555906 CREBBPQ92793 2442 aa18.68■□□□□ 0.58
PRKCH-219ENST00000555906 SCN3AQ9NY46 2000 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 ABCA12Q86UK0 2595 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 LRBAP50851 2863 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 GOLGA6L10A0A0M3HER8 536 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 STSP08842 583 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 ITGAMP11215 1152 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 CCND1P24385 295 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 RGS4P49798 205 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 SNRPNP63162 240 aaKnown RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 RNASEH2BQ5TBB1 312 aaKnown RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 TMEM214Q6NUQ4 689 aaKnown RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 HIBCHQ6NVY1 386 aaPredicted RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 GABPB2Q8TAK5 448 aaPredicted RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 MCOLN3Q8TDD5 553 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 METTL21AQ8WXB1 218 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 NR4A3Q92570 626 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 IMMP1LQ96LU5 166 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 TAAR6Q96RI8 345 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 NDNQ99608 321 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 IARS2Q9NSE4 1012 aaKnown RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 PLA2G3Q9NZ20 509 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 C19orf25Q9UFG5 118 aaPredicted RBP18.67■□□□□ 0.58
PRKCH-219ENST00000555906 ADAMTS6Q9UKP5 1117 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 PDE10AQ9Y233 779 aa18.67■□□□□ 0.58
PRKCH-219ENST00000555906 JRKO75564 520 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 STATHP02808 62 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 CSNK1G2P78368 415 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 TIAL1Q01085 375 aaKnown RBP eCLIP18.66■□□□□ 0.58
PRKCH-219ENST00000555906 PRSS41Q7RTY9 318 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 C17orf64Q86WR6 236 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 CNTN4Q8IWV2 1026 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 MYO1HQ8N1T3 1032 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 CAMKVQ8NCB2 501 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 ACTRT1Q8TDG2 376 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 FAM129AQ9BZQ8 928 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 TAS2R13Q9NYV9 303 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 SH2B3Q9UQQ2 575 aa18.66■□□□□ 0.58
PRKCH-219ENST00000555906 A0A1B0GUH1 482 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 OR5H15A6NDH6 313 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 SLC16A5O15375 505 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 TTC4O95801 387 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 WDPCPO95876 746 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 IL1RNP18510 177 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 XCR1P46094 333 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 ZRSR2Q15696 482 aaKnown RBP18.65■□□□□ 0.58
PRKCH-219ENST00000555906 MINDY4Q4G0A6 757 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 ABHD17BQ5VST6 288 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 AGTRAPQ6RW13 159 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 MBOAT1Q6ZNC8 495 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 PCGF5Q86SE9 256 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 PALM2Q8IXS6 379 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 EEF1AKMT1Q8WVE0 214 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 TM4SF19Q96DZ7 209 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 SGPP1Q9BX95 441 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRKCH-219ENST00000555906 PARVBQ9HBI1 364 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 TEKT2Q9UIF3 430 aa18.65■□□□□ 0.58
PRKCH-219ENST00000555906 BCL6P41182 706 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 AGTR2P50052 363 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 DHX9Q08211 1270 aaKnown RBP18.64■□□□□ 0.57
PRKCH-219ENST00000555906 PPP1R7Q15435 360 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 SPANXN3Q5MJ09 141 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 MFSD4BQ5TF39 518 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 PLAG1Q6DJT9 500 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 LCTLQ6UWM7 567 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 KIAA0408Q6ZU52 694 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 LANCL3Q6ZV70 420 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 CPEB2Q7Z5Q1 589 aaKnown RBP18.64■□□□□ 0.57
PRKCH-219ENST00000555906 GALNT7Q86SF2 657 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 ASPGQ86U10 573 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 SLC34A3Q8N130 599 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 OR51Q1Q8NH59 317 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 SUN3Q8TAQ9 357 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 ZCCHC10Q8TBK6 192 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 OSBPL9Q96SU4 736 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 NAT9Q9BTE0 207 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 ANKHQ9HCJ1 492 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 HCN3Q9P1Z3 774 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 ABI3Q9P2A4 366 aa18.64■□□□□ 0.57
PRKCH-219ENST00000555906 CES2O00748 559 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 DNALI1O14645 258 aaPredicted RBP18.63■□□□□ 0.57
PRKCH-219ENST00000555906 ZG16O60844 167 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 SEC24DO94855 1032 aaPredicted RBP18.63■□□□□ 0.57
PRKCH-219ENST00000555906 F10P00742 488 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 SLC35G6P0C7Q6 338 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 CDH1P12830 882 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 GRK3P35626 688 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 CDKN2DP55273 166 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 ZNF33BQ06732 778 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 PHKG1Q16816 387 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 RBM20Q5T481 1227 aaKnown RBP18.63■□□□□ 0.57
PRKCH-219ENST00000555906 TICAM1Q8IUC6 712 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 LINGO1Q96FE5 620 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 CYTH2Q99418 400 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms