RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 MVB12AQ96EY5 273 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 THOC3Q96J01 351 aaKnown RBP10.26□□□□□ -0.77
TDP1-212ENST00000555565 LMF1Q96S06 567 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 OSBPL9Q96SU4 736 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 NAP1L3Q99457 506 aaPredicted RBP10.26□□□□□ -0.77
TDP1-212ENST00000555565 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 CCDC68Q9H2F9 335 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 ZNF160Q9HCG1 818 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 TRPC4Q9UBN4 977 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 PCYOX1Q9UHG3 505 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 CDC14AQ9UNH5 594 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 SCN2AQ99250 2005 aa10.26□□□□□ -0.77
TDP1-212ENST00000555565 IDSB3KWA1 339 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 MAP2K7O14733 419 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 HAT1O14929 419 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 P2RX6O15547 441 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 ZBTB14O43829 449 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 CCNDBP1O95273 360 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 HPP00738 406 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 AGAP20933 346 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 SLC26A3P40879 764 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 FNTAP49354 379 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 ABATP80404 500 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 TIAL1Q01085 375 aaKnown RBP eCLIP10.25□□□□□ -0.77
TDP1-212ENST00000555565 MFAP5Q13361 173 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 RNASEH2BQ5TBB1 312 aaKnown RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 IRAK1BP1Q5VVH5 260 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 GARNL3Q5VVW2 1013 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 ISLR2Q6UXK2 745 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 GFRALQ6UXV0 394 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 LINC00696Q6ZRV3 163 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 PLD3Q8IV08 490 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 SLC35F6Q8N357 371 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 OR1N1Q8NGS0 311 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 PSMF1Q92530 271 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 RERGQ96A58 199 aaPredicted RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 MMABQ96EY8 250 aaPredicted RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 SPOCK3Q9BQ16 436 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 TREX2Q9BQ50 279 aaPredicted RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 AARSD1Q9BTE6 412 aaKnown RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 ENKD1Q9H0I2 346 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 MCCC2Q9HCC0 563 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 IARS2Q9NSE4 1012 aaKnown RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 ABCF3Q9NUQ8 709 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 UTP6Q9NYH9 597 aaKnown RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 SUCOQ9UBS9 1254 aaKnown RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 COMMD10Q9Y6G5 202 aa10.25□□□□□ -0.77
TDP1-212ENST00000555565 NCOA6Q14686 2063 aaPredicted RBP10.25□□□□□ -0.77
TDP1-212ENST00000555565 A0A0A6YYC8 382 aaPredicted RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 A0A1W2PQ72 361 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 H7BY64 318 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 I3L1I5 382 aaPredicted RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 EIF3FO00303 357 aaPredicted RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 PRPF4O43172 522 aaKnown RBP eCLIP10.24□□□□□ -0.77
TDP1-212ENST00000555565 UNC5CO95185 931 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 COX6A1P12074 109 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 GABRB3P28472 473 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 TNFSF10P50591 281 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 EFNA3P52797 238 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 EMP2P54851 167 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 CRYMQ14894 314 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 SYT16Q17RD7 645 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 TMEM207Q6UWW9 146 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 NDUFAF7Q7L592 441 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 ADCK2Q7Z695 626 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 C2CD4AQ8NCU7 369 aaPredicted RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 GRK7Q8WTQ7 553 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 EEF1AKMT1Q8WVE0 214 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 MTFMTQ96DP5 389 aaKnown RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 PRAP1Q96NZ9 151 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 NDNQ99608 321 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 FAM167BQ9BTA0 163 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 YIPF2Q9BWQ6 316 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 TGIF2Q9GZN2 237 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 DRC3Q9H069 523 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 EPS8L2Q9H6S3 715 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 C14orf105Q9NVL8 296 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 ADAMTS6Q9UKP5 1117 aa10.24□□□□□ -0.77
TDP1-212ENST00000555565 MRPS2Q9Y399 296 aaKnown RBP10.24□□□□□ -0.77
TDP1-212ENST00000555565 IGHV1-45A0A0A0MS14 117 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 NSG1A0A0A6YYJ2 146 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 GOLGA6L10A0A0M3HER8 536 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 TXNDC9O14530 226 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 DNALI1O14645 258 aaPredicted RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 BANF1O75531 89 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 STATHP02808 62 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PRR35P0CG20 571 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 CD1EP15812 388 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PGAM1P18669 254 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 TBPL1P62380 186 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MAT1AQ00266 395 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 TLE4Q04727 773 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 DHX9Q08211 1270 aaKnown RBP10.23□□□□□ -0.77
TDP1-212ENST00000555565 PTK6Q13882 451 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 FAM53BQ14153 422 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 PPP1R7Q15435 360 aa10.23□□□□□ -0.77
TDP1-212ENST00000555565 MSS51Q4VC12 460 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms