RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 TGIF2Q9GZN2 237 aa23.2■■□□□ 1.3
PRKCH-216ENST00000555542 DPH5Q9H2P9 285 aa23.2■■□□□ 1.3
PRKCH-216ENST00000555542 MKL2Q9ULH7 1088 aa23.2■■□□□ 1.3
PRKCH-216ENST00000555542 PSAT1Q9Y617 370 aa23.2■■□□□ 1.3
PRKCH-216ENST00000555542 DOCK10Q96BY6 2186 aa23.2■■□□□ 1.3
PRKCH-216ENST00000555542 KCNE1BA0A087WTH5 132 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 FAM95CA0A1B0GW59 222 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 H0YIG0 161 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 AGFG2O95081 481 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 SLC35G6P0C7Q6 338 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 IL1RNP18510 177 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 BCL6P41182 706 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 CCR8P51685 355 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 ATG9BQ674R7 924 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 LINC00696Q6ZRV3 163 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 Q6ZS92 163 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 SLC26A11Q86WA9 606 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 ZC3H7AQ8IWR0 971 aaKnown RBP23.19■■□□□ 1.3
PRKCH-216ENST00000555542 TBC1D19Q8N5T2 526 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 PPP4R1Q8TF05 950 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 C19orf60Q96EN9 201 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 ANKHQ9HCJ1 492 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 NSMCE4AQ9NXX6 385 aa23.19■■□□□ 1.3
PRKCH-216ENST00000555542 SETXQ7Z333 2677 aaKnown RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 TCP11X1B4DZS4 312 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 PCDH17O14917 1159 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 NSA2O95478 260 aaKnown RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 COX6A1P12074 109 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 NPPBP16860 134 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 ZNF37AP17032 561 aaPredicted RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 CASQ1P31415 396 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 Q0VFX4 171 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 MINDY4Q4G0A6 757 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 ISLR2Q6UXK2 745 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 MAATS1Q7Z4T9 603 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 ZC3HC1Q86WB0 502 aaKnown RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 NKAPQ8N5F7 415 aaKnown RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 DNAJB14Q8TBM8 379 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 PYROXD1Q8WU10 500 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 SLC13A3Q8WWT9 602 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 METTL21AQ8WXB1 218 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 FBXL8Q96CD0 374 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 VPS39Q96JC1 886 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 FAM129AQ9BZQ8 928 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 RIC8BQ9NVN3 520 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 ASF1BQ9NVP2 202 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 COPG1Q9Y678 874 aaKnown RBP23.18■■□□□ 1.3
PRKCH-216ENST00000555542 SHANK1Q9Y566 2161 aa23.18■■□□□ 1.3
PRKCH-216ENST00000555542 RELNP78509 3460 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 CLEC18AA5D8T8 446 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 FAM187AA6NFU0 413 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 E7ESA3 106 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 FANCGO15287 622 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 TP73O15350 636 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 SLC12A2P55011 1212 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 MEF2AQ02078 507 aaPredicted RBP23.17■■□□□ 1.3
PRKCH-216ENST00000555542 SRSF1Q07955 248 aaKnown RBP eCLIP23.17■■□□□ 1.3
PRKCH-216ENST00000555542 C2orf54Q08AI8 447 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 ZNF460Q14592 562 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 TMEM214Q6NUQ4 689 aaKnown RBP23.17■■□□□ 1.3
PRKCH-216ENST00000555542 CLEC18BQ6UXF7 455 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 PRSS41Q7RTY9 318 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 CUZD1Q86UP6 607 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 MFSD9Q8NBP5 474 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 CLEC18CQ8NCF0 446 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 OR56A3Q8NH54 315 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 MOCS1Q9NZB8 636 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 HCN3Q9P1Z3 774 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 TXNDC16Q9P2K2 825 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 CSAG2Q9Y5P2 127 aa23.17■■□□□ 1.3
PRKCH-216ENST00000555542 DOPEY2Q9Y3R5 2298 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 IGHV1-45A0A0A0MS14 117 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 NPEPPSL1A6NEC2 478 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 SGK494L7N484 410 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 NDUFS4O43181 175 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 OR1F1O43749 312 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 LCMT2O60294 686 aaKnown RBP23.16■■□□□ 1.3
PRKCH-216ENST00000555542 SERPIND1P05546 499 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 C8orf89P0DMQ9 161 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 MRPL49Q13405 166 aaKnown RBP23.16■■□□□ 1.3
PRKCH-216ENST00000555542 CSHL1Q14406 222 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 FRA10AC1Q70Z53 315 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 KCT2Q8NC54 265 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 SPATA4Q8NEY3 305 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 OR51Q1Q8NH59 317 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 CDKL2Q92772 493 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 PDLIM5Q96HC4 596 aaKnown RBP23.16■■□□□ 1.3
PRKCH-216ENST00000555542 EGFL8Q99944 293 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 ERP44Q9BS26 406 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 SAYSD1Q9NPB0 183 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 PTGFRNQ9P2B2 879 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 NOVA2Q9UNW9 492 aaKnown RBP23.16■■□□□ 1.3
PRKCH-216ENST00000555542 DYRK1BQ9Y463 629 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 PCDHGA10Q9Y5H3 936 aa23.16■■□□□ 1.3
PRKCH-216ENST00000555542 SCN3AQ9NY46 2000 aa23.15■■□□□ 1.3
PRKCH-216ENST00000555542 BMP10O95393 424 aa23.15■■□□□ 1.3
PRKCH-216ENST00000555542 PRR35P0CG20 571 aa23.15■■□□□ 1.3
PRKCH-216ENST00000555542 XCR1P46094 333 aa23.15■■□□□ 1.3
PRKCH-216ENST00000555542 SNRPNP63162 240 aaKnown RBP23.15■■□□□ 1.3
PRKCH-216ENST00000555542 MFAP5Q13361 173 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms