RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ARL5AQ9Y689 179 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 C17orf102A2RUQ5 167 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ZNF98A6NK75 572 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CA12O43570 354 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 GJB3O75712 270 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 B3GAT3O94766 335 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 GLP2RO95838 553 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ITGB1P05556 798 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RRASP10301 218 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ODC1P11926 461 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 IL1RNP18510 177 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CCT3P49368 545 aaKnown RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 KCNQ1P51787 676 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 GLYR1Q49A26 553 aaPredicted RBP15.16■□□□□ 0.02
SYNE3-203ENST00000554873 MLIPQ5VWP3 458 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 FAM131AQ6UXB0 335 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CEP68Q76N32 757 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PGBD5Q8N414 524 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 CAMKK1Q8N5S9 505 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RHEBL1Q8TAI7 183 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 ARRDC2Q8TBH0 407 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 SLC6A17Q9H1V8 727 aa15.16■□□□□ 0.02
SYNE3-203ENST00000554873 RPS10-NUDT3A0A1W2PQS6 291 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 PLA2G10O15496 165 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 FZD6O60353 706 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RAF1P04049 648 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 HSMCR30P0CW71 290 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RPL9P32969 192 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 SUOXP51687 545 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RPP38P78345 283 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 CARD16Q5EG05 197 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 PDZK1Q5T2W1 519 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 GPR139Q6DWJ6 353 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 GPR149Q86SP6 731 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 METTL23Q86XA0 190 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 UFD1Q92890 307 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 PTP4A1Q93096 173 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 POP5Q969H6 163 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 CRELD1Q96HD1 420 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 TSEN34Q9BSV6 310 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 TFB2MQ9H5Q4 396 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RGS17Q9UGC6 210 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 NEUROG3Q9Y4Z2 214 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 KLF2Q9Y5W3 355 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 LOC285095A0A1B0GVY8 99 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 CLCA1A8K7I4 914 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 TNFRSF10BO14763 440 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 PTHP01270 115 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 TPOP07202 933 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 F8A1P23610 371 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 PTX3P26022 381 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 MAP2K6P52564 334 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 LCP2Q13094 533 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 TP53BP2Q13625 1128 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 ALFQ53S48 1182 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 ANKRD54Q6NXT1 300 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 C19orf48Q6RUI8 117 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 SNX20Q7Z614 316 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 DNAJC22Q8N4W6 341 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 GGHQ92820 318 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RIT1Q92963 219 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 RBPMSQ93062 196 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 CIDECQ96AQ7 238 aaPredicted RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 THUMPD3Q9BV44 507 aaKnown RBP15.15■□□□□ 0.02
SYNE3-203ENST00000554873 FANCFQ9NPI8 374 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 SPASTQ9UBP0 616 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 IKZF3Q9UKT9 509 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 MAPRE3Q9UPY8 281 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 CMAHPQ9Y471 501 aa15.15■□□□□ 0.02
SYNE3-203ENST00000554873 A0A1W2PQH9 124 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 PRSS56P0CW18 603 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 PRDX3P30048 256 aaKnown RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 EVI2BP34910 448 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 POLR2GP62487 172 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 NRG1Q02297 640 aaPredicted RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 XKR7Q5GH72 579 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 LDLRAD1Q5T700 205 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 UBE2J2Q8N2K1 259 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 OR7G3Q8NG95 312 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 OR13C4Q8NGS5 318 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 BTN2A2Q8WVV5 523 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 TADA1Q96BN2 335 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 SP110Q9HB58 689 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 KRT84Q9NSB2 600 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 FKBP7Q9Y680 259 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 DICER1Q9UPY3 1922 aaKnown RBP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 A0A1B0GVM2 712 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 PTP4A3O75365 173 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 CREG1O75629 220 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 PROS1P07225 676 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 ACVR1Q04771 509 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.14■□□□□ 0.01
SYNE3-203ENST00000554873 VEPH1Q14D04 833 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 COL28A1Q2UY09 1125 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 CACHD1Q5VU97 1274 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 SCIMPQ6UWF3 145 aa15.14■□□□□ 0.01
SYNE3-203ENST00000554873 ZNF367Q7RTV3 350 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms