RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 C2orf74A8MZ97 194 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 BLOC1S5-TXNDC5H3BN57 136 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 J3QLW9 94 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF19P17023 458 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SDHBP21912 280 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PTPN4P29074 926 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SHMT1P34896 483 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CD79BP40259 229 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CD97P48960 835 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CCL11P51671 97 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 EPHA5P54756 1037 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MBTD1Q05BQ5 628 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SLC16A9Q7RTY1 509 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GALNT12Q8IXK2 581 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 UBALD1Q8TB05 177 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM125Q96AQ2 219 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 HS6ST2Q96MM7 605 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GPATCH1Q9BRR8 931 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CHST7Q9NS84 486 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 HMGXB4Q9UGU5 601 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 EFCAB6Q5THR3 1501 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 C19orf81C9J6K1 198 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 GPR25O00155 361 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 C6P13671 934 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 HOXA7P31268 230 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SNRPD1P62314 119 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RIPK1Q13546 671 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF267Q14586 743 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 LARS2Q15031 903 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PCGF3Q3KNV8 242 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PTCHD4Q6ZW05 846 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PPIL6Q8IXY8 311 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FMR1NBQ8N0W7 255 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZFP41Q8N8Y5 198 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CLP1Q92989 425 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MFSD14AQ96MC6 490 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 BTBD10Q9BSF8 475 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ACSS3Q9H6R3 686 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 WDR55Q9H6Y2 383 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 NUP153P49790 1475 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 H3BML4 177 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PER1O15534 1290 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PIPP12273 146 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RPS9P46781 194 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PCBP3P57721 371 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 E2F2Q14209 437 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CDK10Q15131 360 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ALG10BQ5I7T1 473 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RNF220Q5VTB9 566 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 MPZL3Q6UWV2 235 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 RBM44Q6ZP01 1051 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMPRSS7Q7RTY8 843 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 WDR31Q8NA23 367 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 FAM47BQ8NA70 645 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ELOVL4Q9GZR5 314 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TMEM27Q9HBJ8 222 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PDP1Q9P0J1 537 aaPredicted RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ANKRD6Q9Y2G4 727 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 TPRKBQ9Y3C4 175 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CPQQ9Y646 472 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 POMT1Q9Y6A1 747 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 EDC4Q6P2E9 1401 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CSH1P0DML2 217 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CSH2P0DML3 217 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 LMO2P25791 158 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 G0S2P27469 103 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PSMB10P40306 273 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PRKXP51817 358 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 CLRN1P58418 232 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ESX1Q8N693 406 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ZNF676Q8N7Q3 588 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PCSK9Q8NBP7 692 aaKnown RBP3.22□□□□□ -1.89
SYNE2-212ENST00000554584 SLC35G5Q96KT7 338 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 OR52E6Q96RD3 313 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 NPFFR2Q9Y5X5 522 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 ATP23Q9Y6H3 246 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 PRR14LQ5THK1 2151 aa3.22□□□□□ -1.89
SYNE2-212ENST00000554584 NLRP1Q9C000 1473 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 YDJCA8MPS7 323 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 HHLA1C9JL84 531 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 CCRL2O00421 344 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 SOX1O00570 391 aaPredicted RBP3.21□□□□□ -1.89
SYNE2-212ENST00000554584 CBX6O95503 412 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 WDPCPO95876 746 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 IGHV3-9P01782 118 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 MYL9P24844 172 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 PTGS2P35354 604 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 TGFBR2P37173 567 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 ARRB1P49407 418 aaPredicted RBP3.21□□□□□ -1.89
SYNE2-212ENST00000554584 RPS24P62847 133 aaKnown RBP3.21□□□□□ -1.89
SYNE2-212ENST00000554584 IRF5Q13568 498 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 ANKRD34AQ69YU3 496 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 MZT2AQ6P582 158 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.21□□□□□ -1.89
SYNE2-212ENST00000554584 MBOAT1Q6ZNC8 495 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 LRP11Q86VZ4 500 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 ZFP28Q8NHY6 868 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 MSL2Q9HCI7 577 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 HK1P19367 917 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 SEC23BQ15437 767 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms