RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 IP6K3Q96PC2 410 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 ROPN1BQ9BZX4 212 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 UNKQ9C0B0 810 aaKnown RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 SLC26A1Q9H2B4 701 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 ROPN1Q9HAT0 212 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 CLK4Q9HAZ1 481 aaKnown RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 IFT80Q9P2H3 777 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 COPG2Q9UBF2 871 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 DHCR7Q9UBM7 475 aaKnown RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 IL17BQ9UHF5 180 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 DCDC2Q9UHG0 476 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 GPN3Q9UHW5 284 aaPredicted RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 ZFP69BQ9UJL9 534 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 LHX6Q9UPM6 363 aa8.91□□□□□ -0.98
CHD8-206ENST00000553870 RUVBL1Q9Y265 456 aaKnown RBP8.91□□□□□ -0.98
CHD8-206ENST00000553870 URADA6NGE7 173 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 STX16-NPEPL1H3BU86 382 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 K7EPI3 171 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 UBXN8O00124 270 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 STX16O14662 325 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 OR1F1O43749 312 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 LCMT2O60294 686 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 NRP2O60462 931 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SMIM24O75264 130 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 CTSBP07858 339 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 GSTA1P08263 222 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SLC35G6P0C7Q6 338 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 GFAPP14136 432 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 EPB42P16452 691 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 WT1P19544 449 aaPredicted RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 F8A1P23610 371 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 HPDP32754 393 aaPredicted RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 GDF5P43026 501 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 GLRBP48167 497 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PIK3CGP48736 1102 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 HSPA7P48741 367 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SKP1P63208 163 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 REEP5Q00765 189 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SSPNQ14714 243 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 NAA30Q147X3 362 aaPredicted RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 SETDB1Q15047 1291 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PDK4Q16654 411 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 HIST2H2ACQ16777 129 aaPredicted RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 UGT8Q16880 541 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 TECRLQ5HYJ1 363 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PAGE2BQ5JRK9 111 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 CATSPEREQ5SY80 951 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 HIST2H2AA3Q6FI13 130 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 LCN10Q6JVE6 187 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 MRPL14Q6P1L8 145 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 FAM199XQ6PEV8 388 aaPredicted RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 SLCO4C1Q6ZQN7 724 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 OVCH1Q7RTY7 1134 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 VN1R4Q7Z5H5 301 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PLD6Q8N2A8 252 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 MZB1Q8WU39 189 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 THAP4Q8WY91 577 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 STARD8Q92502 1023 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 UBE2E3Q969T4 207 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PTCD3Q96EY7 689 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 TMEM79Q9BSE2 394 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 EFCAB11Q9BUY7 163 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 MRPL46Q9H2W6 279 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 WDR54Q9H977 334 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 ZNF304Q9HCX3 659 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 STARD5Q9NSY2 213 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 OPTCQ9UBM4 332 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 NDOR1Q9UHB4 597 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 NXT1Q9UKK6 140 aaKnown RBP8.9□□□□□ -0.98
CHD8-206ENST00000553870 TCFL5Q9UL49 500 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SH2B3Q9UQQ2 575 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 SLC22A7Q9Y694 548 aa8.9□□□□□ -0.98
CHD8-206ENST00000553870 PKD1L2Q7Z442 2459 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 IGLV3-12A0A075B6K2 115 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 H0YIG0 161 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ERVH48-1M5A8F1 160 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 PCDH17O14917 1159 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 NKX2-8O15522 239 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 CCNT2O60583 730 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 UGDHO60701 494 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 WFS1O76024 890 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 NSA2O95478 260 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 IGHEP01854 428 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 SHBGP04278 402 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 SERPINA6P08185 405 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 TAC1P20366 129 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 ITGAXP20702 1163 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 BCL6P41182 706 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 AVPR1BP47901 424 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 CCT5P48643 541 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 RGS1Q08116 209 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 SRSF6Q13247 344 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 HERC3Q15034 1050 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 PFKFB4Q16877 469 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 HKDC1Q2TB90 917 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 C18orf21Q32NC0 220 aaPredicted RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 C1orf189Q5VU69 101 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 MLIPQ5VWP3 458 aa8.89□□□□□ -0.99
CHD8-206ENST00000553870 TMEM214Q6NUQ4 689 aaKnown RBP8.89□□□□□ -0.99
CHD8-206ENST00000553870 FAM198BQ6UWH4 519 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms