RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 A0A087X1B8 175 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 EXOC1LA0A1B0GW35 172 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 A0A1W2PPV9 198 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 KRT87PA6NCN2 255 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 NPEPPSL1A6NEC2 478 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CXorf49A8MYA2 514 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 POC1B-GALNT4F8VUJ3 575 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PHGDHO43175 533 aaKnown RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PRICKLE3O43900 615 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 H2AFYO75367 372 aaKnown RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PIAS1O75925 651 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TIAF1O95411 115 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 RAB40ALP0C0E4 278 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ARAFP10398 606 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PRKAR1AP10644 381 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 SFTPCP11686 197 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 IMPDH2P12268 514 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 EZRP15311 586 aaKnown RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ITGAXP20702 1163 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CNTFP26441 200 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ADH6P28332 368 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TYK2P29597 1187 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 SERPINB8P50452 374 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PMS2P54278 862 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CDKL1Q00532 357 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TIAL1Q01085 375 aaKnown RBP eCLIP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CSHL1Q14406 222 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ZNF460Q14592 562 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ZIC1Q15915 447 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 FAM83EQ2M2I3 478 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 MUM1Q2TAK8 710 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 WASHC2DQ5SRD0 308 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 MROH9Q5TGP6 573 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 MLIPQ5VWP3 458 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 FBXW10Q5XX13 1052 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 FCRL6Q6DN72 434 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 RHBDD2Q6NTF9 364 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 LCTLQ6UWM7 567 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TTLL10Q6ZVT0 673 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 GPSM1Q86YR5 675 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 DSELQ8IZU8 1212 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 FLVCR1-AS1Q8TAF5 88 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 STAG3L4Q8TBR4 150 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CT55Q8WUE5 264 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 STARD8Q92502 1023 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TTC9Q92623 222 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 VPS50Q96JG6 964 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CABS1Q96KC9 395 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 PLCD4Q9BRC7 762 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 DHRS4Q9BTZ2 278 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CAPS2Q9BXY5 557 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 TWSG1Q9GZX9 223 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 SPRTNQ9H040 489 aaPredicted RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CAB39LQ9H9S4 337 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CUTCQ9NTM9 273 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 WWOXQ9NZC7 414 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CD274Q9NZQ7 290 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 RNF112Q9ULX5 631 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 G3BP2Q9UN86 482 aaKnown RBP7.98□□□□□ -1.13
PSEN1-209ENST00000553855 CDC14AQ9UNH5 594 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 ACOT9Q9Y305 439 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 OARD1Q9Y530 152 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 KLK4Q9Y5K2 254 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 KCNE2Q9Y6J6 123 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 BPTFQ12830 3046 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 UNC79Q9P2D8 2635 aa7.98□□□□□ -1.13
PSEN1-209ENST00000553855 APC2O95996 2303 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 A0A1B0GX78 115 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 OR2A25A4D2G3 310 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 NCF1BA6NI72 391 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 SYCE1LA8MT33 242 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 NCF1CA8MVU1 366 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 H7BY64 318 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CDC7O00311 574 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CREG1O75629 220 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 TSPAN12O95859 305 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 ITGB2P05107 769 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 LTA4HP09960 611 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 NCF1P14598 390 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CXCR2P25025 360 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PTPN4P29074 926 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 SLC26A3P40879 764 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CCR10P46092 362 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CCR8P51685 355 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 RPS15AP62244 130 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 SKP1P63208 163 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 RELAQ04206 551 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 CLCQ05315 142 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 GPS2Q13227 327 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 ERV3-1Q14264 604 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 TSNQ15631 228 aaKnown RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PHKG1Q16816 387 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PTCHD3Q3KNS1 767 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PRAMEF17Q5VTA0 474 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 C1orf189Q5VU69 101 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 PRMT9Q6P2P2 845 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 FAM199XQ6PEV8 388 aaPredicted RBP7.97□□□□□ -1.13
PSEN1-209ENST00000553855 BORAQ6PGQ7 559 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 GK5Q6ZS86 529 aa7.97□□□□□ -1.13
PSEN1-209ENST00000553855 RNF44Q7L0R7 432 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms