RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 RNF6Q9Y252 685 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PLXND1Q9Y4D7 1925 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CCDC88CQ9P219 2028 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PRRC2BQ5JSZ5 2229 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PRAMEF25A6NGN4 478 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 KPNA4O00629 521 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SCAMP2O15127 329 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HOXA2O43364 376 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PCDH7O60245 1069 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PQBP1O60828 265 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 NTRK1P04629 796 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HIST1H2AGP0C0S8 130 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 ATP1B2P14415 290 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CD36P16671 472 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HIST1H2ADP20671 130 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 GABRR2P28476 465 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CD40LGP29965 261 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 C21orf33P30042 268 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 RRM2P31350 389 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SLC19A1P41440 591 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 MAPK8P45983 427 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PREPP48147 710 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 NUDT6P53370 316 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CXCR4P61073 352 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 IRF8Q02556 426 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 DOC2AQ14183 400 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 DOC2BQ14184 412 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HIST2H2ACQ16777 129 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SOWAHCQ53LP3 525 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 XKR6Q5GH73 641 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CDKL4Q5MAI5 379 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 COX20Q5RI15 118 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 Q6ZVU0 165 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HSD11B1LQ7Z5J1 315 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 TCAIMQ8N3R3 496 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 CPA6Q8N4T0 437 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 C1orf52Q8N6N3 182 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 PHF10Q8WUB8 498 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 C11orf24Q96F05 449 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HIST1H2AHQ96KK5 128 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 HIST1H2AJQ99878 128 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 C19orf43Q9BQ61 176 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 H2AFJQ9BTM1 129 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 RNF167Q9H6Y7 350 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SPATA6Q9NWH7 488 aaPredicted RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SLCO3A1Q9UIG8 710 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 RPS6KA6Q9UK32 745 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 FZD4Q9ULV1 537 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 SLC6A14Q9UN76 642 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 EXO1Q9UQ84 846 aaKnown RBP6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 TESMINQ9Y4I5 508 aa6.69□□□□□ -1.34
LINC-ROR-201ENST00000553704 GABRR3A8MPY1 467 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 FADS2P1A8MWK0 482 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 M0R082 166 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 AOC2O75106 756 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 C9P02748 559 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 ABCB1P08183 1280 aaPredicted RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 ADRA2AP08913 450 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 MPC1LP0DKB6 136 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 CYP2A7P20853 494 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 HNMTP50135 292 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 HNRNPFP52597 415 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 SP3Q02447 781 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 SFSWAPQ12872 951 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 CSTF3Q12996 717 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 DGUOKQ16854 277 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 TPGS2Q68CL5 300 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 PRSS48Q7RTY5 328 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 THOC6Q86W42 341 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 RASGRP3Q8IV61 690 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 ELMOD1Q8N336 334 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 OR8J2Q8NGG1 315 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 FIBINQ8TAL6 211 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 MED8Q96G25 268 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 TSEN34Q9BSV6 310 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 DUSP26Q9BV47 211 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 GABARAPL3Q9BY60 117 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 RAD18Q9NS91 495 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 GPATCH2Q9NW75 528 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 FAM120CQ9NX05 1096 aaKnown RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 SCN3BQ9NY72 215 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 KLHL42Q9P2K6 505 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 VPS29Q9UBQ0 182 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 RAPGEFL1Q9UHV5 662 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 OSGIN1Q9UJX0 560 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 ACSL6Q9UKU0 697 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 SH2B3Q9UQQ2 575 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 CCL26Q9Y258 94 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 PCDHB11Q9Y5F2 797 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 HSPE1-MOB4S4R3N1 261 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 PDE4DIPQ5VU43 2346 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 SERTM1A2A2V5 107 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 EFCAB9A8MZ26 197 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 EIF3FO00303 357 aaPredicted RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 AQP9O43315 295 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 RFPL2O75678 378 aa6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
LINC-ROR-201ENST00000553704 GBAP04062 536 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms