RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 TCTN2Q96GX1 697 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 MAGEB10Q96LZ2 347 aaPredicted RBP4.07□□□□□ -1.76
ERBB3-220ENST00000552691 C3orf30Q96M34 536 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 FCRL4Q96PJ5 515 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 FRG2BQ96QU4 278 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 OR2A5Q96R48 311 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
ERBB3-220ENST00000552691 SLC29A3Q9BZD2 475 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 PITHD1Q9GZP4 211 aaPredicted RBP4.07□□□□□ -1.76
ERBB3-220ENST00000552691 CHRNA10Q9GZZ6 450 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 ZMYND15Q9H091 742 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 EPN3Q9H201 632 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 TUBB1Q9H4B7 451 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 SYNDIG1Q9H7V2 258 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 SYNPO2LQ9H987 977 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 FAM60AQ9NP50 221 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 PDE7BQ9NP56 450 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 FARSBQ9NSD9 589 aaKnown RBP4.07□□□□□ -1.76
ERBB3-220ENST00000552691 MARCOQ9UEW3 520 aaPredicted RBP4.07□□□□□ -1.76
ERBB3-220ENST00000552691 KLHL3Q9UH77 587 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 PILRAQ9UKJ1 303 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 SNX6Q9UNH7 406 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 TSC22D4Q9Y3Q8 395 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 PCDHGA11Q9Y5H2 935 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 PCDHGA1Q9Y5H4 931 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 DNAJC15Q9Y5T4 150 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 USH1CQ9Y6N9 552 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 AP1M2Q9Y6Q5 423 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 AHCTF1Q8WYP5 2266 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 MED13Q9UHV7 2174 aa4.07□□□□□ -1.76
ERBB3-220ENST00000552691 SPTBN2O15020 2390 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 DCHS1Q96JQ0 3298 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 LOC105369274A0A096LPK9 316 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 LOC102723532A0A0G2JNH3 316 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 A0A0J9YVX5 310 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SRRM3A6NNA2 597 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 MAGEB17A8MXT2 336 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 D6RAR5 112 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 H0YGG7 62 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 FOXE1O00358 373 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SDHDO14521 159 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SLC30A4O14863 429 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PIP5K1BO14986 540 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HDAC3O15379 428 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 TOX3O15405 576 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 MAP3K7O43318 606 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HCRTR1O43613 425 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SKAP2O75563 359 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 DKK1O94907 266 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ZBTB11O95625 1053 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 TBX6O95947 436 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CHEK2O96017 543 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 TGFB1P01137 390 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 KRT6AP02538 564 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 KRT6BP04259 564 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 JUNP05412 331 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ANKRD34CP0C6C1 535 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 FTH1P19P0C7X4 201 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 LINC00032P0C843 101 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 MSL3P1P0C860 447 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 TROVE2P10155 538 aaKnown RBP eCLIP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CDK4P11802 303 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PCNAP12004 261 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CEACAM1P13688 526 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HSD3B1P14060 373 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 FOLR1P15328 257 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ALOX15P16050 662 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 NELFEP18615 380 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CSRP1P21291 193 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 DRD4P21917 467 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HSD3B2P26439 372 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 GSTM2P28161 218 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PIK3CBP42338 1070 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 MLLT3P42568 568 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SCTRP47872 440 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 GABRA4P48169 554 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 KRT6CP48668 564 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HTR6P50406 440 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PDX1P52945 283 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ARF3P61204 181 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 RPS13P62277 151 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CYP4F2P78329 520 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PHEXP78562 749 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 HSD11B2P80365 405 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CBX1P83916 185 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 INSM1Q01101 510 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 BTKQ06187 659 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ZNF33BQ06732 778 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CYP4F3Q08477 520 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SF3A3Q12874 501 aaKnown RBP eCLIP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 TRA2AQ13595 282 aaKnown RBP eCLIP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 DDX39BQ13838 428 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 KCNAB1Q14722 419 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PDCD2Q16342 344 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SLC9B1Q4ZJI4 515 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 CCDC157Q569K6 752 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 SGO1Q5FBB7 561 aa4.06□□□□□ -1.76
ERBB3-220ENST00000552691 ZC3H12BQ5HYM0 836 aaKnown RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 C10orf62Q5T681 223 aaPredicted RBP4.06□□□□□ -1.76
ERBB3-220ENST00000552691 PHF19Q5T6S3 580 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms