RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	NRARP	Q7Z6K4	114 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ADGRD2	Q7Z7M1	963 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PRIMA1	Q86XR5	153 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ZDHHC17	Q8IUH5	632 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	C12orf56	Q8IXR9	622 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	DSEL	Q8IZU8	1212 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	LRRC75A-AS1	Q8N1F1	130 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SPATA4	Q8NEY3	305 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TMEM170A	Q8WVE7	144 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PIBF1	Q8WXW3	757 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	OSTF1	Q92882	214 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CTHRC1	Q96CG8	243 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ORAI1	Q96D31	301 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	RSPRY1	Q96DX4	576 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	LRR1	Q96L50	414 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TRNT1	Q96Q11	434 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	CYTH2	Q99418	400 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	DDO	Q99489	341 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TEX101	Q9BY14	249 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	DNTTIP1	Q9H147	329 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CUEDC2	Q9H467	287 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CATSPERB	Q9H7T0	1116 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ZFP14	Q9HCL3	533 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	BPIFA1	Q9NP55	256 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TUBG2	Q9NRH3	451 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ARL15	Q9NXU5	204 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	WWOX	Q9NZC7	414 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PKD2L2	Q9NZM6	624 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	EMC3	Q9P0I2	261 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PDP1	Q9P0J1	537 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	VPS54	Q9P1Q0	977 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SEMA5B	Q9P283	1151 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ONECUT1	Q9UBC0	465 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PCDHA12	Q9UN75	941 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PRELID1	Q9Y255	219 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SH3GLB1	Q9Y371	365 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ATP6V1D	Q9Y5K8	247 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	RNF215	Q9Y6U7	377 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	KANK1	Q14678	1352 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ILVBL	A1L0T0	632 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	IQCF5	A8MTL0	148 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ANKRD66	B4E2M5	251 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ZNF701	M0R085	212 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	HIP1	O00291	1037 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ZW10	O43264	779 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TSPAN1	O60635	241 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SORBS2	O94875	1100 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	LUC7L3	O95232	432 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	ECD	O95905	644 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	KRT6A	P02538	564 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	GLA	P06280	429 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	KRT19	P08727	400 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CLTA	P09496	248 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	STAG3L2	P0CL84	134 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	RRAS	P10301	218 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CPA3	P15088	417 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ANPEP	P15144	967 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	FOSL2	P15408	326 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CD22	P20273	847 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TGM2	P21980	687 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	LMO1	P25800	156 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ELAVL4	P26378	380 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	MARCKS	P29966	332 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	PPP2R1A	P30153	589 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SLC8A1	P32418	973 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	LIPA	P38571	399 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SST	P61278	116 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TUBA1B	P68363	451 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CXADR	P78310	365 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	BLOC1S1	P78537	153 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	MRPS21	P82921	87 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	COL10A1	Q03692	680 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	CACNG1	Q06432	222 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	FUT7	Q11130	342 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	GK2	Q14410	553 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	MAPK6	Q16659	721 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TCTN1	Q2MV58	587 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ZNF829	Q3KNS6	432 aa	Predicted RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	ZNF618	Q5T7W0	954 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	WLS	Q5T9L3	541 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SEL1L3	Q68CR1	1132 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TTC23L	Q6PF05	361 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	SYCE2	Q6PIF2	218 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	KYAT3	Q6YP21	454 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	TUBA1A	Q71U36	451 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ANO5	Q75V66	913 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	GDF7	Q7Z4P5	450 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	HAPLN4	Q86UW8	402 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	DTX2	Q86UW9	622 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	LAX1	Q8IWV1	398 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	GCNT2	Q8N0V5	402 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	PYROXD2	Q8N2H3	581 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	TMEM132C	Q8N3T6	1108 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	ASCC1	Q8N9N2	400 aa	Known RBP	4	□□□□□ -1.77
USP44-208	ENST00000552440	OR4A16	Q8NH70	328 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	WDR20	Q8TBZ3	569 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	MAIP1	Q8WWC4	291 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	GLG1	Q92896	1179 aa		4	□□□□□ -1.77
USP44-208	ENST00000552440	HARBI1	Q96MB7	349 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms