RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 UGT8Q16880 541 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 NXPE4Q6UWF7 544 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 RAB43Q86YS6 212 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 KLHDC8AQ8IYD2 350 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 RHEBL1Q8TAI7 183 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 ISL2Q96A47 359 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 MTBPQ96DY7 904 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 MVB12AQ96EY5 273 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 SCYL1Q96KG9 808 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 ATOH8Q96SQ7 321 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 TMEM79Q9BSE2 394 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 DRC3Q9H069 523 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 ZNF304Q9HCX3 659 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 GPRC5BQ9NZH0 403 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 PSMC3IPQ9P2W1 217 aaPredicted RBP17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 MAN2B2Q9Y2E5 1009 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 MAU2Q9Y6X3 613 aa17.61■□□□□ 0.41
PRPF40B-216ENST00000552301 CLGNO14967 610 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 TAPBPO15533 448 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 CCNT2O60583 730 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 H2AFYO75367 372 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 SERPIND1P05546 499 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 GFAPP14136 432 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 GGT5P36269 586 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 MAGEA12P43365 314 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 CSRP3P50461 194 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 REEP5Q00765 189 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 RGS1Q08116 209 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 IL10RAQ13651 578 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 PDK4Q16654 411 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 TSNAXIP1Q2TAA8 658 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 FBXO48Q5FWF7 155 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 LRRC70Q7Z2Q7 622 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 VN1R4Q7Z5H5 301 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 OR4K1Q8NGD4 311 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 SLC13A3Q8WWT9 602 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 THAP4Q8WY91 577 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 WBP1Q96G27 269 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 SYNPO2LQ9H987 977 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 FETUBQ9UGM5 382 aa17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 PTBP2Q9UKA9 531 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 NXT1Q9UKK6 140 aaKnown RBP17.6■□□□□ 0.41
PRPF40B-216ENST00000552301 NDUFS4O43181 175 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 MED26O95402 600 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ALBP02768 609 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 RBP1P09455 135 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ITGAXP20702 1163 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 OTX2P32243 289 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 AVPR1BP47901 424 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 OCA2Q04671 838 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 RBBP5Q15291 538 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ADGRD1Q6QNK2 874 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 OVCH1Q7RTY7 1134 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 KRT78Q8N1N4 520 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 DTWD1Q8N5C7 304 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 LSM14AQ8ND56 463 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 OR2Y1Q8NGV0 311 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ZCCHC10Q8TBK6 192 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 APOBEC4Q8WW27 367 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ESAMQ96AP7 390 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 MMABQ96EY8 250 aaPredicted RBP17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 YIPF2Q9BWQ6 316 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 WDR54Q9H977 334 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 PRM3Q9NNZ6 103 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 CPSF2Q9P2I0 782 aaKnown RBP17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 OPTCQ9UBM4 332 aa17.59■□□□□ 0.41
PRPF40B-216ENST00000552301 ITPR1Q14643 2758 aa17.58■□□□□ 0.41
PRPF40B-216ENST00000552301 LCMT2O60294 686 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ONECUT2O95948 504 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 C1GALT1C1LP0DN25 315 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 COL6A2P12110 1019 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 VARSP26640 1264 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 SCTRP47872 440 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 KCNC1P48547 511 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 VSNL1P62760 191 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 DSG2Q14126 1118 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 FAM53BQ14153 422 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 SLBPQ14493 270 aaKnown RBP eCLIP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 FAM69BQ5VUD6 431 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ATG9BQ674R7 924 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 MRPL14Q6P1L8 145 aaKnown RBP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 COX15Q7KZN9 410 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 UBTD2Q8WUN7 234 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 SLC39A7Q92504 469 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 SARGQ9BW04 601 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 CD244Q9BZW8 370 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 EPB41L4BQ9H329 900 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ANKHQ9HCJ1 492 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 SLC22A11Q9NSA0 550 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 TRPC4Q9UBN4 977 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 CTSFQ9UBX1 484 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ZNF282Q9UDV7 671 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ZFP69BQ9UJL9 534 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 ANGPTL3Q9Y5C1 460 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 V9GYY5 206 aaPredicted RBP17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 NBEAQ8NFP9 2946 aa17.58■□□□□ 0.4
PRPF40B-216ENST00000552301 A0A0A6YYC8 382 aaPredicted RBP17.57■□□□□ 0.4
PRPF40B-216ENST00000552301 I3L1I5 382 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms