RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 EPOP01588 193 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 EIF2S1P05198 315 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 HEXAP06865 529 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 C8BP07358 591 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ITGALP20701 1170 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 KDELR1P24390 212 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ACADLP28330 430 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 PKLRP30613 574 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 PTGS2P35354 604 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CD96P40200 585 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CDKN1CP49918 316 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 AP2B1P63010 937 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 DYNLT1P63172 113 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 KLHL30Q0D2K2 578 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 SNTB1Q13884 538 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 FASTKQ14296 549 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 MUM1Q2TAK8 710 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 RNF187Q5TA31 235 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 TMEM211Q6ICI0 200 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 SPINK14Q6IE38 97 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 PRMT9Q6P2P2 845 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 SNX20Q7Z614 316 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CRLF3Q8IUI8 442 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CLYBLQ8N0X4 340 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 OR4N4Q8N0Y3 316 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 RPRMLQ8N4K4 120 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CLDN19Q8N6F1 224 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LINC01555Q8NAE3 123 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 TMEM178AQ8NBL3 297 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ACRBPQ8NEB7 543 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 OR5K2Q8NHB8 316 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 FAM57AQ8TBR7 257 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 HEXDCQ8WVB3 486 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ELMO1Q92556 727 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 RND1Q92730 232 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 HDAC10Q969S8 669 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 SCMH1Q96GD3 660 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 SEC16BQ96JE7 1060 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 IMMP1LQ96LU5 166 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 C10orf90Q96M02 699 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 OLFM3Q96PB7 478 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 IL17FQ96PD4 163 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 UTP23Q9BRU9 249 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 TUBB6Q9BUF5 446 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 ZNF700Q9H0M5 742 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 THAP2Q9H0W7 228 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CLEC4MQ9H2X3 399 aaPredicted RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 VPS37BQ9H9H4 285 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LUC7LQ9NQ29 371 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 INTS7Q9NVH2 962 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 LIMA1Q9UHB6 759 aaKnown RBP5.07□□□□□ -1.6
HOXB3-213ENST00000552000 POLG2Q9UHN1 485 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 GNPTGQ9UJJ9 305 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 MYO6Q9UM54 1294 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 L3MBTL1Q9Y468 752 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 FAM169AQ9Y6X4 670 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 CADP27708 2225 aa5.07□□□□□ -1.6
HOXB3-213ENST00000552000 IGLV3-16A0A075B6K0 115 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 A0A1B0GTH9 108 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 USP27XA6NNY8 438 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 GABRR3A8MPY1 467 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 AGAP14A8MT82 685 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 LIN7AO14910 233 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 TFECO14948 347 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 KLK8O60259 260 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 KDM1AO60341 852 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 CDC40O60508 579 aaKnown RBP eCLIP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SRPX2O60687 465 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SEC24DO94855 1032 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 PROSCO94903 275 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 AGTP01019 485 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 CYP1A2P05177 515 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SP1P08047 785 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 PRSS56P0CW18 603 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 C8orf89P0DMQ9 161 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 ERVK-10P10266 1014 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 ICAM2P13598 275 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 FUT4P22083 530 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 RFC3P40938 356 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 PRKCIP41743 596 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 EFNA3P52797 238 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 CSE1LP55060 971 aaKnown RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 DLX5P56178 289 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 NUP107P57740 925 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 UBE2HP62256 183 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 OC90Q02509 493 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 PMPCAQ10713 525 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 WASHC5Q12768 1159 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 MPP3Q13368 585 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 TAF1AQ15573 450 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SF1Q15637 639 aaKnown RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 TAZQ16635 292 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 MAPKAPK3Q16644 382 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SYT16Q17RD7 645 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 BTBD16Q32M84 506 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SYTL3Q4VX76 610 aa5.06□□□□□ -1.6
HOXB3-213ENST00000552000 CT47A1Q5JQC4 288 aaPredicted RBP5.06□□□□□ -1.6
HOXB3-213ENST00000552000 SLC9A4Q6AI14 798 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms