RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 EXO1Q9UQ84 846 aaKnown RBP18.91■□□□□ 0.62
SSH1-209ENST00000551165 KLHL20Q9Y2M5 609 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 PLXND1Q9Y4D7 1925 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 TNFRSF10CO14798 259 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 KCNH1O95259 989 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 ACPPP15309 386 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 ZP2Q05996 745 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 LAPTM5Q13571 262 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 KBTBD2Q8IY47 623 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 OR4E2Q8NGC2 313 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 TESCQ96BS2 214 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 MIEF2Q96C03 454 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 C15orf41Q9Y2V0 281 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 LAMA1P25391 3075 aa18.91■□□□□ 0.62
SSH1-209ENST00000551165 ARHGAP10A1A4S6 786 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 A6NCN8 305 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 PRICKLE3O43900 615 aaPredicted RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 PCDH7O60245 1069 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 STATHP02808 62 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 GCKP35557 465 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 SLC19A1P41440 591 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 CSNK1G2P78368 415 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 TRAP1Q12931 704 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 EIF2B5Q13144 721 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 LRRC36Q1X8D7 754 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 LPCAT4Q643R3 524 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 DHFR2Q86XF0 187 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 SPPL2CQ8IUH8 684 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 FBXL6Q8N531 539 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 OR4K1Q8NGD4 311 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 SLC6A18Q96N87 628 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 REXO4Q9GZR2 422 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 PAIP1Q9H074 479 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 WNT16Q9UBV4 365 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 PCDHB14Q9Y5E9 798 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 NUP214P35658 2090 aaPredicted RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 GNG14A0A1W2PPG7 69 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 ZNF839A8K0R7 811 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 NPPAP01160 153 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 LAMP1P11279 417 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 PRPS1L1P21108 318 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 TIA1P31483 386 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSH1-209ENST00000551165 CCR8P51685 355 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 CLNS1AP54105 237 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 WNT3P56703 355 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 OR4D2P58180 307 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 PRDX1Q06830 199 aaKnown RBP18.9■□□□□ 0.62
SSH1-209ENST00000551165 SPIN4Q56A73 249 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 ADCK2Q7Z695 626 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 LILRA2Q8N149 483 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 KRT78Q8N1N4 520 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 C10orf111Q8N326 155 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 SLCO4A1Q96BD0 722 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 ANKRD27Q96NW4 1050 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 PELI2Q9HAT8 420 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 MUC3AQ02505 3323 aa18.9■□□□□ 0.62
SSH1-209ENST00000551165 A0A1W2PPC4 97 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 RTCAO00442 366 aaKnown RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 THEGLP0DJG4 465 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 PIM1P11309 404 aaPredicted RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 PTPN6P29350 595 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 VHLP40337 213 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 GRIA3P42263 894 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 PIK3CBP42338 1070 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 RABIFP47224 123 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 ADHFE1Q8IWW8 467 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 F2RL3Q96RI0 385 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 AIF1LQ9BQI0 150 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 PCBD2Q9H0N5 130 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 SYNPO2LQ9H987 977 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 SLC6A20Q9NP91 592 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 GABRR3A8MPY1 467 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 SCN2BO60939 215 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 MYO1DO94832 1006 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 KLK1P06870 262 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 MAOBP27338 520 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 REEP5Q00765 189 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 MC1RQ01726 317 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 FZD2Q14332 565 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 WLSQ5T9L3 541 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 GPR153Q6NV75 609 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 RAB42Q8N4Z0 105 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 RSRC1Q96IZ7 334 aaKnown RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 KCTD14Q9BQ13 255 aaPredicted RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 MACROD1Q9BQ69 325 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 PCOLCE2Q9UKZ9 415 aa18.89■□□□□ 0.61
SSH1-209ENST00000551165 MRPS17Q9Y2R5 130 aaKnown RBP18.89■□□□□ 0.61
SSH1-209ENST00000551165 MYO15AQ9UKN7 3530 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 TDRD6O60522 2096 aaKnown RBP18.88■□□□□ 0.61
SSH1-209ENST00000551165 TRBV5-3A0A0A0MS03 114 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 ARPC2O15144 300 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 OR1F1O43749 312 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 C8BP07358 591 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 COX7A2P14406 83 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 MTAPQ13126 283 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 GALNT18Q6P9A2 607 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 WASH2PQ6VEQ5 465 aa18.88■□□□□ 0.61
SSH1-209ENST00000551165 GPR180Q86V85 440 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms