RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 CATSPEREQ5SY80 951 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 ATG9BQ674R7 924 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 ATG16L1Q676U5 607 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 ZNF425Q6IV72 752 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 TLDC1Q6P9B6 456 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 SLCO4C1Q6ZQN7 724 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 TMPRSS11BQ86T26 416 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 MYLK4Q86YV6 388 aaPredicted RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 OR4K1Q8NGD4 311 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 RAB3IL1Q8TBN0 382 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 PTCD3Q96EY7 689 aaKnown RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 PRR11Q96HE9 360 aaPredicted RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 CNDP1Q96KN2 507 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 MAGEB10Q96LZ2 347 aaPredicted RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 NDC1Q9BTX1 674 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 EFCAB11Q9BUY7 163 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 SHCBP1LQ9BZQ2 653 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 C20orf27Q9GZN8 174 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 PITHD1Q9GZP4 211 aaPredicted RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 EHD1Q9H4M9 534 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 NOL11Q9H8H0 719 aaKnown RBP12.5□□□□□ -0.41
TROAP-212ENST00000550346 ACTR8Q9H981 624 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 STK38LQ9Y2H1 464 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 SEC16AO15027 2179 aa12.5□□□□□ -0.41
TROAP-212ENST00000550346 AKAP13Q12802 2813 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 KCNE1BA0A087WTH5 132 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 A0A1B0GTL3 188 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TRBC2A0A5B9 178 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ANKDD1BA6NHY2 528 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TMEM114B3SHH9 223 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 H0YGG7 62 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 UBFD1O14562 309 aaKnown RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 KLF11O14901 512 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 HAT1O14929 419 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 PRAMEF4O60810 478 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 CTSVO60911 334 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 SNNO75324 88 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 CLDN9O95484 217 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 MLYCDO95822 493 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 SERPIND1P05546 499 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 CHRNGP07510 517 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 SLC5A2P31639 672 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ETV5P41161 510 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 HNF4AP41235 474 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 CASP2P42575 452 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ARSFP54793 590 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ERVPABLB-1P60509 514 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ARF3P61204 181 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 ABCE1P61221 599 aaKnown RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 CYP4F3Q08477 520 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 DOC2AQ14183 400 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 GRM7Q14831 915 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TBCCQ15814 346 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ARL13AQ5H913 290 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 PRAMEF9Q5VWM5 478 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 LIPJQ5W064 366 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 FAM219BQ5XKK7 198 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TMIGD1Q6UXZ0 262 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 MILR1Q7Z6M3 343 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 BMPERQ8N8U9 685 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 MFSD9Q8NBP5 474 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 CAMKVQ8NCB2 501 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TRPV3Q8NET8 790 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 TTLQ8NG68 377 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 OR52B6Q8NGF0 335 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ZNF501Q96CX3 271 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 REPS1Q96D71 796 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 SIDT1Q9NXL6 827 aaKnown RBP12.49□□□□□ -0.41
TROAP-212ENST00000550346 ZNF225Q9UK10 706 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 WASF3Q9UPY6 502 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 PCDHGA7Q9Y5G6 932 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 PCDHGA3Q9Y5H0 932 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 NCOR2Q9Y618 2525 aa12.49□□□□□ -0.41
TROAP-212ENST00000550346 IGKV1-8A0A0C4DH67 115 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
TROAP-212ENST00000550346 FEZF1A0PJY2 475 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 TCP11X1B4DZS4 312 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 BRINP1O60477 761 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 SCRG1O75711 98 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 HSPA4LO95757 839 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 OTCP00480 354 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 KLK3P07288 261 aaPredicted RBP12.48□□□□□ -0.41
TROAP-212ENST00000550346 ALAS2P22557 587 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 VARSP26640 1264 aaKnown RBP12.48□□□□□ -0.41
TROAP-212ENST00000550346 CD82P27701 267 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 AHRP35869 848 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 SERPINB5P36952 375 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 MEF2AQ02078 507 aaPredicted RBP12.48□□□□□ -0.41
TROAP-212ENST00000550346 LCP2Q13094 533 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 NDUFA9Q16795 377 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 DEFB110Q30KQ9 67 aa12.48□□□□□ -0.41
TROAP-212ENST00000550346 MANEAQ5SRI9 462 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms