RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ZNF552Q9H707 407 aaPredicted RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 SLC6A20Q9NP91 592 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 C5AR2Q9P296 337 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 CTSFQ9UBX1 484 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 PLEKHB1Q9UF11 243 aaPredicted RBP12.82□□□□□ -0.36
NUP188-211ENST00000550219 B3GNT3Q9Y2A9 372 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 MAU2Q9Y6X3 613 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 MAST4O15021 2626 aa12.82□□□□□ -0.36
NUP188-211ENST00000550219 NBASA2RRP1 2371 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 COL12A1Q99715 3063 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 FLNCQ14315 2725 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 A0A087X1B8 175 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 A0A096LPK6 155 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 A0A1W2PPM1 405 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 DSCR3O14972 297 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 RGS16O15492 202 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 NRP2O60462 931 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 MYZAPP0CAP1 466 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 ENO3P13929 434 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 KRT15P19012 456 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 CCNFP41002 786 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 OR1D4P47884 311 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 VSX2P58304 361 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 SLC18A2Q05940 514 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 TSTA3Q13630 321 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 GRM7Q14831 915 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 PLEKHN1Q494U1 663 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 ACSBG2Q5FVE4 666 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 COX15Q7KZN9 410 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 CPNE9Q8IYJ1 553 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 FKBP10Q96AY3 582 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 RAD51AP1Q96B01 352 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 SNRNP40Q96DI7 357 aaKnown RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 CABS1Q96KC9 395 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 FOPNLQ96NB1 174 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 ZBTB20Q9HC78 741 aaPredicted RBP12.81□□□□□ -0.36
NUP188-211ENST00000550219 GPAMQ9HCL2 828 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 ATP13A2Q9NQ11 1180 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 ASF1BQ9NVP2 202 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 ACOT9Q9Y305 439 aa12.81□□□□□ -0.36
NUP188-211ENST00000550219 SNRNP200O75643 2136 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 A0A0J9YVX5 310 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 FOXO6A8MYZ6 492 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 KLHL41O60662 606 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 CTSVO60911 334 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 IPO13O94829 963 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 C1orf105O95561 183 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 EIF2S1P05198 315 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 MPC1LP0DKB6 136 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 PIM1P11309 404 aaPredicted RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 COL6A2P12110 1019 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 VARSP26640 1264 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 GCGRP47871 477 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 GLRBP48167 497 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 IL2P60568 153 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 DLG1Q12959 904 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 AIMP2Q13155 320 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 RBBP7Q16576 425 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 NKG7Q16617 165 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 TCTE1Q5JU00 501 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 AGBL2Q5U5Z8 902 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 IRAK1BP1Q5VVH5 260 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 FRMPD2BQ6IN97 320 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 RAPH1Q70E73 1250 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 PRSS58Q8IYP2 241 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 CENPLQ8N0S6 344 aaPredicted RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 ZADH2Q8N4Q0 377 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 NKAPQ8N5F7 415 aaKnown RBP12.8□□□□□ -0.36
NUP188-211ENST00000550219 DENND1AQ8TEH3 1009 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 EEF1AKMT1Q8WVE0 214 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 ANKRD49Q8WVL7 239 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 TLCD1Q96CP7 247 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 GPR78Q96P69 363 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 SPSB2Q99619 263 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 ACAT2Q9BWD1 397 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 DERL2Q9GZP9 239 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 SENP1Q9P0U3 644 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 CSAG2Q9Y5P2 127 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 ACTL7BQ9Y614 415 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 NUP210LQ5VU65 1888 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 SHANK1Q9Y566 2161 aa12.8□□□□□ -0.36
NUP188-211ENST00000550219 GOLGA6L10A6NI86 522 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 SOCS6O14544 535 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 MATN4O95460 622 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 CCDC166P0CW27 439 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 PYGBP11216 843 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 MMP11P24347 488 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 RGS4P49798 205 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 TUBB8Q3ZCM7 444 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 WASHC2DQ5SRD0 308 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 PRAMEF13Q5VWM6 474 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 LCA5Q86VQ0 697 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 PARP9Q8IXQ6 854 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 OR2L3Q8NG85 312 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 ARL8AQ96BM9 186 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 CNDP1Q96KN2 507 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 CRB3Q9BUF7 120 aa12.79□□□□□ -0.36
NUP188-211ENST00000550219 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms