RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 RGS4P49798 205 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 RPL14P50914 215 aaKnown RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MNAT1P51948 309 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MTTPP55157 894 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SUMO3P55854 103 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CORO7P57737 925 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 IRX4P78413 519 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ACTN3Q08043 901 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MAP4K2Q12851 820 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 IRF4Q15306 451 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 OR4D1Q15615 310 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TTC31Q49AM3 519 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KCNT1Q5JUK3 1230 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ZFP1Q6P2D0 407 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 USP53Q70EK8 1073 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SNX32Q86XE0 403 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TP53INP2Q8IXH6 220 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 SAP25Q8TEE9 199 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 WDR92Q96MX6 357 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF681Q96N22 645 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 TSSK3Q96PN8 268 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 WWP1Q9H0M0 922 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 DMRT3Q9NQL9 472 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 PRDM8Q9NQV8 689 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 KCMF1Q9P0J7 381 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 MARCH4Q9P2E8 410 aaPredicted RBP4.69□□□□□ -1.66
SCAF11-212ENST00000549162 EMC9Q9Y3B6 208 aa4.69□□□□□ -1.66
SCAF11-212ENST00000549162 EXOC1LA0A1B0GW35 172 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 UBFD1O14562 309 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF749O43361 778 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZNF806P0C7X5 589 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ETS1P14921 441 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 IMPA1P29218 277 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PPP2R1BP30154 601 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 AKT2P31751 481 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CA5AP35218 305 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 FAPQ12884 760 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 IL18R1Q13478 541 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CDH18Q13634 790 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 KRTAP27-1Q3LI81 207 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 DNAL1Q4LDG9 190 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 NHSL2Q5HYW2 709 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 WLSQ5T9L3 541 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ERICH5Q6P6B1 374 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TRMT10BQ6PF06 316 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CDHR3Q6ZTQ4 885 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 DEFB128Q7Z7B8 93 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ASPGQ86U10 573 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SLC22A18ASQ8N1D0 253 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 NKAIN3Q8N8D7 197 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ANKFN1Q8N957 763 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TXNDC5Q8NBS9 432 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 FAM3CQ92520 227 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 AGAP2Q99490 1192 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 BBS2Q9BXC9 721 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SEMA6CQ9H3T2 930 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 MANSC1Q9H8J5 431 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 POLD4Q9HCU8 107 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CCM2LQ9NUG4 571 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 IKZF3Q9UKT9 509 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PDE10AQ9Y233 779 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 NDUFAF1Q9Y375 327 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PRSS51A0A1B0GVH4 220 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 HSPB2A8KAH6 182 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SCAMP1O15126 338 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 RGS16O15492 202 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZSCAN9O15535 394 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 RNASEH1O60930 286 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TM7SF2O76062 418 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 RECQL5O94762 991 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 HBQ1P09105 142 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 AMD1P17707 334 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 OAS2P29728 719 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 BSGP35613 385 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TAS2R39P59534 338 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TGFBIQ15582 683 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 HSPB2Q16082 182 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 FASTKD1Q53R41 847 aaKnown RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 USP51Q70EK9 711 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 OTOAQ7RTW8 1153 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PID1Q7Z2X4 250 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 SERPINA9Q86WD7 417 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PALM2Q8IXS6 379 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PIANPQ8IYJ0 282 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ZBED8Q8IZ13 594 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PHACTR4Q8IZ21 702 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 DTWD2Q8NBA8 298 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 OR56A4Q8NGH8 313 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 COPS8Q99627 209 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PITX2Q99697 317 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 CORO1BQ9BR76 489 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PRDM6Q9NQX0 595 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 GKN1Q9NS71 199 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 MS4A12Q9NXJ0 267 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 PTGFRNQ9P2B2 879 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 STOX2Q9P2F5 926 aaPredicted RBP4.68□□□□□ -1.66
SCAF11-212ENST00000549162 ABCG2Q9UNQ0 655 aa4.68□□□□□ -1.66
SCAF11-212ENST00000549162 TRIM33Q9UPN9 1127 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms