RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ASB5Q8WWX0 329 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 ATG4AQ8WYN0 398 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 GPR137Q96N19 417 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 DMRTA2Q96SC8 542 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 EBNA1BP2Q99848 306 aaKnown RBP8.03□□□□□ -1.12
TROAP-208ENST00000548817 SMR3AQ99954 134 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 TUBB6Q9BUF5 446 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 IL22Q9GZX6 179 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 NPDC1Q9NQX5 325 aaPredicted RBP8.03□□□□□ -1.12
TROAP-208ENST00000548817 ABCF3Q9NUQ8 709 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 STOX2Q9P2F5 926 aaPredicted RBP8.03□□□□□ -1.12
TROAP-208ENST00000548817 C19orf25Q9UFG5 118 aaPredicted RBP8.03□□□□□ -1.12
TROAP-208ENST00000548817 MKL2Q9ULH7 1088 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 VPS9D1Q9Y2B5 631 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 ZKSCAN5Q9Y2L8 839 aa8.03□□□□□ -1.12
TROAP-208ENST00000548817 CPAMD8Q8IZJ3 1885 aa8.02□□□□□ -1.12
TROAP-208ENST00000548817 IGLV3-12A0A075B6K2 115 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 IGHV1-45A0A0A0MS14 117 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TCRBV7S2A1N4TA0A589 114 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 OR2A25A4D2G3 310 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 OR5H15A6NDH6 313 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TTI1O43156 1089 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 PROM1O43490 865 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 VAPBO95292 243 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 WDPCPO95876 746 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ESR1P03372 595 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 C8orf89P0DMQ9 161 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 MSX1P28360 303 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ATP5DP30049 168 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 SLC26A3P40879 764 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 DGKQP52824 942 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ABATP80404 500 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 BASP1P80723 227 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 SARNPP82979 210 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 TFF3Q07654 80 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ARHGAP19Q14CB8 494 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 OASLQ15646 514 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 PRTGQ2VWP7 1150 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TTLL9Q3SXZ7 439 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 CCSMST1Q4G0I0 132 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 HIBCHQ6NVY1 386 aaPredicted RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 LRRC8BQ6P9F7 803 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 RAD9BQ6WBX8 426 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 DTWD1Q8N5C7 304 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 C1orf54Q8WWF1 131 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 RMND5BQ96G75 393 aaPredicted RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 HES6Q96HZ4 224 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ZNF354BQ96LW1 612 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 C10orf90Q96M02 699 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TCF12Q99081 682 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 BAG1Q99933 345 aaPredicted RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 PLCD4Q9BRC7 762 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TSGA10Q9BZW7 698 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 TGIF2Q9GZN2 237 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 DRC3Q9H069 523 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 ZNF700Q9H0M5 742 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 P2RY12Q9H244 342 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 CCDC68Q9H2F9 335 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 MARCH4Q9P2E8 410 aaPredicted RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 RUVBL2Q9Y230 463 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 RUVBL1Q9Y265 456 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 REXO2Q9Y3B8 237 aaKnown RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 HEATR5BQ9P2D3 2071 aa8.02□□□□□ -1.13
TROAP-208ENST00000548817 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.13
TROAP-208ENST00000548817 A0A0A6YYC8 382 aaPredicted RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 A0A1W2PPV9 198 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 FAM227AF5H4B4 570 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 I3L1I5 382 aaPredicted RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 PRRG2O14669 202 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 FFAR3O14843 346 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 GPR42O15529 346 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 CTAG2O75638 210 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 MED26O95402 600 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 MATN4O95460 622 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 TSPAN12O95859 305 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 SYF2O95926 243 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 ITGAMP11215 1152 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 ETS1P14921 441 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 EZRP15311 586 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 ABOP16442 354 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 PAMP19021 973 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 NMBRP28336 390 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 ZNF75DP51815 510 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 PNLIPRP1P54315 467 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 CRADDP78560 199 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 PRDX1Q06830 199 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 ACTN3Q08043 901 aaPredicted RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 GTF3C1Q12789 2109 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 FASTKQ14296 549 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 HKDC1Q2TB90 917 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 MINDY4Q4G0A6 757 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 ZNF766Q5HY98 468 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 ICE2Q659A1 982 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 SUSD1Q6UWL2 747 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 MTERF4Q7Z6M4 381 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 PAQR7Q86WK9 346 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 SLC13A5Q86YT5 568 aaPredicted RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 CLYBLQ8N0X4 340 aa8.01□□□□□ -1.13
TROAP-208ENST00000548817 RNF10Q8N5U6 811 aaKnown RBP8.01□□□□□ -1.13
TROAP-208ENST00000548817 HORMAD2Q8N7B1 307 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms