RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ANKRD37Q7Z713 158 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 SPPL2CQ8IUH8 684 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 REXO1L1PQ8IX06 675 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ARHGEF39Q8N4T4 335 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 OR51Q1Q8NH59 317 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF480Q8WV37 535 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 LPGAT1Q92604 370 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 PEX13Q92968 403 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 ALKBH8Q96BT7 664 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 UTP23Q9BRU9 249 aaKnown RBP11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 RNF32Q9H0A6 362 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 LZTFL1Q9NQ48 299 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 POLQO75417 2590 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 PDZD2O15018 2839 aa11.29□□□□□ -0.6
TRAFD1-205ENST00000548277 A0A1W2PQ72 361 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 TCRBV7S3A2A0A539 114 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 FEZF1A0PJY2 475 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 E7ENX8 843 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MYO1CO00159 1063 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 TXNDC9O14530 226 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 AVILO75366 819 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 CCNDBP1O95273 360 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 ERGP11308 486 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 EZRP15311 586 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 ABOP16442 354 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 EEF1DP29692 281 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 XCR1P46094 333 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 KCNJ1P48048 391 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 TAP2Q03519 686 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 FAM53BQ14153 422 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 SIX1Q15475 284 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 CCNG2Q16589 344 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MAPKAPK3Q16644 382 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MEP1AQ16819 746 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 GALNTL5Q7Z4T8 443 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MPP5Q8N3R9 675 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MCOLN3Q8TDD5 553 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 PEX11GQ96HA9 241 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 GPR137Q96N19 417 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 NPAS2Q99743 824 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 IL22Q9GZX6 179 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 CDCP1Q9H5V8 836 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 FAM114A2Q9NRY5 505 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 C19orf25Q9UFG5 118 aaPredicted RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 DRG1Q9Y295 367 aaKnown RBP11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
TRAFD1-205ENST00000548277 DNAJC13O75165 2243 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 CTAGE9A4FU28 777 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF860A6NHJ4 632 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 GABRR3A8MPY1 467 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 PFDN6O15212 129 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 DIAPH2O60879 1101 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 PHF2O75151 1096 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 KRT38O76015 456 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ESR1P03372 595 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 CD46P15529 392 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 GBX1Q14549 363 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ARHGAP19Q14CB8 494 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 SFT2D3Q587I9 215 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 PLAG1Q6DJT9 500 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 CASC4Q6P4E1 433 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 PAPD4Q6PIY7 484 aaKnown RBP11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 CENPUQ71F23 418 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 PRELID2Q8N945 189 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 KCT2Q8NC54 265 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 MDS2Q8NDY4 140 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 AGAP11Q8TF27 550 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 GPAMQ9HCL2 828 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 FBXO6Q9NRD1 293 aaPredicted RBP11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF835Q9Y2P0 537 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF407Q9C0G0 2248 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 H0YIG0 161 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 H3BMM5 538 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ASNA1O43681 348 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ZBTB14O43829 449 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 LCMT2O60294 686 aaKnown RBP11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 DNAJB6O75190 326 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 RDH16O75452 317 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 FGGP02679 453 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 SP1P08047 785 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 CCDC175P0C221 793 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 SSTR2P30874 369 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 HSD17B2P37059 387 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 BCL6P41182 706 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 VPS41P49754 854 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 CLCN7P51798 805 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ABATP80404 500 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 TLE4Q04727 773 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 CTBP1Q13363 440 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 NSDHLQ15738 373 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 TYSND1Q2T9J0 566 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 KRTCAP3Q53RY4 240 aa11.26□□□□□ -0.61
TRAFD1-205ENST00000548277 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms