RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF740Q8NDX6 193 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CEP70Q8NHQ1 597 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 METTL2AQ96IZ6 378 aaKnown RBP15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 CENPKQ9BS16 269 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 PDE7BQ9NP56 450 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 SEMA5BQ9P283 1151 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 BTRCQ9Y297 605 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 AP1M2Q9Y6Q5 423 aa15.18■□□□□ 0.02
TRAFD1-203ENST00000547063 UNC13CQ8NB66 2214 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 FEZF1A0PJY2 475 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SLC9B1P1A6NJY1 282 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 CLEC3AO75596 197 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ANKRD34CP0C6C1 535 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 LINC00032P0C843 101 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ST6GAL1P15907 406 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PTX3P26022 381 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 CSF2RBP32927 897 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 LSSP48449 732 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 HSD11B2P80365 405 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 DDX39BQ13838 428 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SPIDRQ14159 915 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SMU1Q2TAY7 513 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 XKR7Q5GH72 579 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TCHHL1Q5QJ38 904 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TMTC4Q5T4D3 741 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 FCRL6Q6DN72 434 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 RNF44Q7L0R7 432 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PARP9Q8IXQ6 854 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 RFWD2Q8NHY2 731 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 HUS1BQ8NHY5 278 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ACTRT2Q8TDY3 377 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ZNF473Q8WTR7 871 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 RERGQ96A58 199 aaPredicted RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TUBGCP3Q96CW5 907 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 MTFMTQ96DP5 389 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 THOC1Q96FV9 657 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 CMTM7Q96FZ5 175 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 MAELQ96JY0 434 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PPP3R2Q96LZ3 170 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 RILPQ96NA2 401 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 MTERF1Q99551 399 aaKnown RBP15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SERPINI1Q99574 410 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 CCDC28BQ9BUN5 200 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TMEM120AQ9BXJ8 343 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SPNS1Q9H2V7 528 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TUBB1Q9H4B7 451 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SYNDIG1Q9H7V2 258 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 KCNK13Q9HB14 408 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 TCF7L2Q9NQB0 619 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 MRGBPQ9NV56 204 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 SOHLH2Q9NX45 425 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PDP2Q9P2J9 529 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PILRAQ9UKJ1 303 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 KLHL20Q9Y2M5 609 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ARL2BPQ9Y2Y0 163 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 PCDHGA4Q9Y5G9 962 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 ASXL3Q9C0F0 2248 aa15.17■□□□□ 0.02
TRAFD1-203ENST00000547063 A0A1W2PQM1 296 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NPIPB8E9PQR5 432 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NTN3O00634 580 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 SDHDO14521 159 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 TXNDC9O14530 226 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 RSL1D1O76021 490 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 PVRP15151 417 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 PCSK2P16519 638 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 BCL6P41182 706 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 MLLT3P42568 568 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 ACADVLP49748 655 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 IDH3AP50213 366 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 HTR6P50406 440 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NEK2P51955 445 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 IRX1P78414 480 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 CFHR1Q03591 330 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 RGS1Q08116 209 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 MAD2L1Q13257 205 aaPredicted RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 TRA2AQ13595 282 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 PWP1Q13610 501 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NR6A1Q15406 480 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 ATP6AP1LQ52LC2 224 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 MANEAQ5SRI9 462 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 METTL21CQ5VZV1 264 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 CHSY3Q70JA7 882 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 MAVSQ7Z434 540 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 PIP4P1Q86T03 277 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■■■■ 102.3
TRAFD1-203ENST00000547063 C10orf82Q8WW14 230 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NUDT22Q9BRQ3 303 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 NLNQ9BYT8 704 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 RABEP2Q9H5N1 569 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 DMRT3Q9NQL9 472 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 FARSBQ9NSD9 589 aaKnown RBP15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 AHSPQ9NZD4 102 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 VPS29Q9UBQ0 182 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 KLHL3Q9UH77 587 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 TRIM33Q9UPN9 1127 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 PCDHGA1Q9Y5H4 931 aa15.16■□□□□ 0.02
TRAFD1-203ENST00000547063 IGHV5-51A0A0C4DH38 117 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 URADA6NGE7 173 aa15.15■□□□□ 0.02
TRAFD1-203ENST00000547063 MAGEB17A8MXT2 336 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms