RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 RNASE12Q5GAN4 147 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 NKAPLQ5M9Q1 402 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 FAM171BQ6P995 826 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 FAM151BQ6UXP7 276 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 LMO3Q8TAP4 145 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PPIL3Q9H2H8 161 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CLEC4AQ9UMR7 237 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 C1orf196B1AJZ1 125 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PI15O43692 258 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ARHGEF15O94989 841 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TECRLQ5HYJ1 363 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 C6orf136Q5SQH8 315 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 FRG2Q64ET8 278 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CES5AQ6NT32 575 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 WDR53Q7Z5U6 358 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CPNE8Q86YQ8 564 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CEP97Q8IW35 865 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 OR10H5Q8NGA6 315 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TRAPPC12Q8WVT3 735 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 KCTD13Q8WZ19 329 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 OSTF1Q92882 214 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 UPF1Q92900 1129 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TXNDC15Q96J42 360 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ALPK1Q96QP1 1244 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 FRG2BQ96QU4 278 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 IL4I1Q96RQ9 567 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 MRI1Q9BV20 369 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CIPCQ9C0C6 399 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TMEM5Q9Y2B1 443 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 A0A1W2PRB8 838 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 GKN3PP0CG01 181 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 POU2F1P14859 743 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 HSD17B2P37059 387 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF460Q14592 562 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PON2Q15165 354 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TMPRSS11BQ86T26 416 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CMTR2Q8IYT2 770 aaKnown RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CYP2S1Q96SQ9 504 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TPT1P8Q9HAU6 139 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 ITM2CQ9NQX7 267 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
PTCH1-212ENST00000546744 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.44□□□□□ -0.42
PTCH1-212ENST00000546744 TRBC2A0A5B9 178 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 EIF1AYO14602 144 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 XKRYO14609 159 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 MT-CYBP00156 380 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 GM2AP17900 193 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 EIF1AXP47813 144 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PSEN2P49810 448 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 NUDT6P53370 316 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 CRYBB1P53674 252 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 NFKB2Q00653 900 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 SF3A2Q15428 464 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 CDKL4Q5MAI5 379 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 BCO2Q9BYV7 579 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 SIAEQ9HAT2 523 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 BPIFA1Q9NP55 256 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 AGPAT4Q9NRZ5 378 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 SNED1Q8TER0 1413 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TMEM233B4DJY2 109 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 DNASE1L1P49184 302 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 GDI2P50395 445 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 CCR4P51679 360 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 E2F1Q01094 437 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 DSC2Q02487 901 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 CD47Q08722 323 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 ST3GAL3Q11203 375 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TAF1CQ15572 869 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 GRK1Q15835 563 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 COL28A1Q2UY09 1125 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PAQR3Q6TCH7 311 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PGAP1Q75T13 922 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 RNF44Q7L0R7 432 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 NEIL3Q8TAT5 605 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 LYARQ9NX58 379 aaKnown RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PLEKHA6Q9Y2H5 1048 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TNFRSF10AO00220 468 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 GMFGO60234 142 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 DDNO94850 711 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 BMP1P13497 986 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF3P17036 446 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PCDH1Q08174 1060 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 NIPAL4Q0D2K0 466 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 NAE1Q13564 534 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 C9orf131Q5VYM1 1079 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 DESI1Q6ICB0 168 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 CGB2Q6NT52 195 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 METAP1DQ6UB28 335 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-212ENST00000546744 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 AQP11Q8NBQ7 271 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TTLQ8NG68 377 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 LRRN4Q8WUT4 740 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms