RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 KIR2DS3Q14952 304 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TGFBIQ15582 683 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CYP2A13Q16696 494 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PHF19Q5T6S3 580 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SPESP1Q6UW49 350 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GK5Q6ZS86 529 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 FAM92BQ6ZTR7 304 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 USP53Q70EK8 1073 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TMPRSS9Q7Z410 1059 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PRSS42Q7Z5A4 293 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 B3GNT8Q7Z7M8 397 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CROCCP2Q86T23 111 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ISCA2Q86U28 154 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TRIM73Q86UV7 250 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TRABD2AQ86V40 505 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GPSM1Q86YR5 675 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 KRTAP1-3Q8IUG1 177 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PLXDC1Q8IUK5 500 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SRRM1Q8IYB3 904 aaKnown RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SYTL1Q8IYJ3 562 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ADGRF3Q8IZF5 1079 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 C4orf33Q8N1A6 199 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 DCBLD1Q8N8Z6 715 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PDPRQ8NCN5 879 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 OR4D9Q8NGE8 314 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 RHEBL1Q8TAI7 183 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 STAG3L4Q8TBR4 150 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ZNF480Q8WV37 535 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ATL1Q8WXF7 558 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ADAMTS14Q8WXS8 1223 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SMPDL3AQ92484 453 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 NCSTNQ92542 709 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 FBXL8Q96CD0 374 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 NXNL1Q96CM4 212 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 MED8Q96G25 268 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ZDHHC12Q96GR4 267 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 APOPT1Q96IL0 206 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SCYL1Q96KG9 808 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HIST1H2AHQ96KK5 128 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CCDC138Q96M89 665 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 GPR78Q96P69 363 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 DEPDC7Q96QD5 511 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ATOH8Q96SQ7 321 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CD180Q99467 661 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HIST1H2AJQ99878 128 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 EGFL8Q99944 293 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 DPYSL5Q9BPU6 564 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 H2AFJQ9BTM1 129 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TRIM54Q9BYV2 358 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 PITPNM3Q9BZ71 974 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 TWSG1Q9GZX9 223 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 RAB33BQ9H082 229 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 MRPL46Q9H2W6 279 aaKnown RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CENPHQ9H3R5 247 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CCDC177Q9NQR7 707 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-211ENST00000546304 HRASLS2Q9NWW9 162 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 MKS1Q9NXB0 559 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SPHK1Q9NYA1 384 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ACTR10Q9NZ32 417 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 WWOXQ9NZC7 414 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 SENP1Q9P0U3 644 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 EPHA6Q9UF33 1036 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 LNPEPQ9UIQ6 1025 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 CLCA2Q9UQC9 943 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 ENTPD2Q9Y5L3 495 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 DMXL2Q8TDJ6 3036 aa6.1□□□□□ -1.43
PRKDC-211ENST00000546304 IGHV5-10-1A0A0J9YXX1 117 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 A0A0J9YY10 115 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 A0A1W2PPM1 405 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 A0A1W2PPV9 198 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SHISA3A0PJX4 238 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 E7ENX8 843 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 UBXN8O00124 270 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 COPEO14579 308 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CSO75390 466 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CCNDBP1O95273 360 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RECKO95980 971 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 MT-CO3P00414 261 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 GSTA1P08263 222 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ANXA5P08758 320 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RBP1P09455 135 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ANKRD34CP0C6C1 535 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 GFAPP14136 432 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RAC2P15153 192 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CDH3P22223 829 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CCND1P24385 295 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 RPA3P35244 121 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 HNMTP50135 292 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 INHBCP55103 352 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TAP2Q03519 686 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 EGR3Q06889 387 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 TSTA3Q13630 321 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 FASTKQ14296 549 aaKnown RBP6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ACAP2Q15057 778 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 SLC5A12Q1EHB4 618 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 ISXQ2M1V0 245 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 CDKL4Q5MAI5 379 aa6.09□□□□□ -1.43
PRKDC-211ENST00000546304 N4BP2L1Q5TBK1 243 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms