RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ZNF33BQ06732 778 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 TUBA3CQ13748 450 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 RPS6KA1Q15418 735 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 C3AR1Q16581 482 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF470Q6ECI4 717 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 NEPROQ6NW34 567 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 TTC27Q6P3X3 843 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 TUBA3EQ6PEY2 450 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 RPTNQ6XPR3 784 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 PIWIL4Q7Z3Z4 852 aaKnown RBP11.85□□□□□ -0.51
COPS7A-221ENST00000546229 ANKRD37Q7Z713 158 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 MRGPRGQ86SM5 289 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF227Q86WZ6 799 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 BEST3Q8N1M1 668 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 ADAMTS18Q8TE60 1221 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 LURAP1Q96LR2 239 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 CYTH2Q99418 400 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 MACROD1Q9BQ69 325 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 SEC14L3Q9UDX4 400 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 MTORP42345 2549 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 TRGV8A0A0C4DH27 118 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 H7BY64 318 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 TXNDC9O14530 226 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 KIF5CO60282 957 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 WFS1O76024 890 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CRYABP02511 175 aaKnown RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ANXA5P08758 320 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 IL1RNP18510 177 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CHRM3P20309 590 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 HTR1EP28566 365 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 COILP38432 576 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 BCL6P41182 706 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 SLC1A2P43004 574 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CSNK1G2P78368 415 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF766Q5HY98 468 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ACER2Q5QJU3 275 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ABHD17BQ5VST6 288 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 FCRLBQ6BAA4 426 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 TMEM207Q6UWW9 146 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CPEB2Q7Z5Q1 589 aaKnown RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 FGD2Q7Z6J4 655 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CRLF3Q8IUI8 442 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 TXLNBQ8N3L3 684 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 AFAP1L2Q8N4X5 818 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 OTUD6BQ8N6M0 293 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 THAP3Q8WTV1 239 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 RERGQ96A58 199 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 GPR137Q96N19 417 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 TREX2Q9BQ50 279 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 FBXO6Q9NRD1 293 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 HCN3Q9P1Z3 774 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 TINAGQ9UJW2 476 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ADAMTS6Q9UKP5 1117 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 GUCA1BQ9UMX6 200 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 DHRS7Q9Y394 339 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 SETD2Q9BYW2 2564 aaPredicted RBP11.84□□□□□ -0.51
COPS7A-221ENST00000546229 SCN3AQ9NY46 2000 aa11.84□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF839A8K0R7 811 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 CCL21O00585 134 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 ADAM10O14672 748 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 NEURL1O76050 574 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 FGGP02679 453 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 ICAM2P13598 275 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
COPS7A-221ENST00000546229 AGAP20933 346 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 XCR1P46094 333 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 ST13P50502 369 aaKnown RBP11.83□□□□□ -0.52
COPS7A-221ENST00000546229 RPS15AP62244 130 aaKnown RBP11.83□□□□□ -0.52
COPS7A-221ENST00000546229 AP2B1P63010 937 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 CTBP1Q13363 440 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 PTK6Q13882 451 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 TESK1Q15569 626 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 RNFT1Q5M7Z0 435 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 MBOAT1Q6ZNC8 495 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 ZNF662Q6ZS27 426 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 NCCRP1Q6ZVX7 275 aaPredicted RBP11.83□□□□□ -0.52
COPS7A-221ENST00000546229 GDF7Q7Z4P5 450 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 CPNE9Q8IYJ1 553 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 KCT2Q8NC54 265 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 OR51Q1Q8NH59 317 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 GPR21Q99679 349 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 TRIM51Q9BSJ1 452 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 SARGQ9BW04 601 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 SGPP1Q9BX95 441 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 TSGA10Q9BZW7 698 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 TMEM184CQ9NVA4 438 aa11.83□□□□□ -0.52
COPS7A-221ENST00000546229 CTAGE15A4D2H0 777 aa11.82□□□□□ -0.52
COPS7A-221ENST00000546229 E5RI56 91 aa11.82□□□□□ -0.52
COPS7A-221ENST00000546229 SGK494L7N484 410 aa11.82□□□□□ -0.52
COPS7A-221ENST00000546229 EIF3FO00303 357 aaPredicted RBP11.82□□□□□ -0.52
COPS7A-221ENST00000546229 LCMT2O60294 686 aaKnown RBP11.82□□□□□ -0.52
COPS7A-221ENST00000546229 DNAJB6O75190 326 aa11.82□□□□□ -0.52
COPS7A-221ENST00000546229 RDH16O75452 317 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms