RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 IPO7O95373 1038 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 HRGP04196 525 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 PEX19P40855 299 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 HLCSP50747 726 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 EMP3P54852 163 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 DBN1Q16643 649 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 SYTL3Q4VX76 610 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 SFT2D3Q587I9 215 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 CCDC170Q8IYT3 715 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 LRRC75A-AS1Q8N1F1 130 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 OR2L3Q8NG85 312 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 RNASE6Q93091 150 aaKnown RBP14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 KIAA1191Q96A73 305 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 PERPQ96FX8 193 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 SAE1Q9UBE0 346 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 C19orf25Q9UFG5 118 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 KLK4Q9Y5K2 254 aa14.4□□□□□ -0.1
CLSTN3-216ENST00000545663 TRBV5-4A0A0C4DH59 114 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 C5orf60A6NFR6 353 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 FIGNL2A6NMB9 653 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 ARHGEF33A8MVX0 844 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 PPP1R12AO14974 1030 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 AKR1B10O60218 316 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 IFNA2P01563 188 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 BMP7P18075 431 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 ZNF140P52738 457 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 TAS2R50P59544 299 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 PPIAP62937 165 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 SLC9A4Q6AI14 798 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 PRSS57Q6UWY2 283 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 TXLNBQ8N3L3 684 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 OR9A4Q8NGU2 314 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 FCRL5Q96RD9 977 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 SMC6Q96SB8 1091 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 DRC3Q9H069 523 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 DEPPQ9NTK1 212 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 TRMT1Q9NXH9 659 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 ALKBH4Q9NXW9 302 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 SLC39A10Q9ULF5 831 aa14.39□□□□□ -0.11
CLSTN3-216ENST00000545663 OR2A25A4D2G3 310 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 MYO1FO00160 1098 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 CLDN4O14493 209 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 KCNAB3O43448 404 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 AP2A2O94973 939 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 CNOT4O95628 575 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 STATHP02808 62 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 GSTM1P09488 218 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 SKILP12757 684 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 BMP5P22003 454 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 TRHRP34981 398 aaPredicted RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 CYLC1P35663 651 aaPredicted RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 MLF1P58340 268 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 SLC26A5P58743 744 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 DYNLT1P63172 113 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 GSTM4Q03013 218 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 RUNX1T1Q06455 604 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 ACTN3Q08043 901 aaPredicted RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 MSLNQ13421 630 aaPredicted RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 USP10Q14694 798 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 SLC18A3Q16572 532 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 GPR33Q49SQ1 333 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 CCSMST1Q4G0I0 132 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 DNAJC21Q5F1R6 531 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 C1orf185Q5T7R7 199 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 PRSS41Q7RTY9 318 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 ZNF567Q8N184 647 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 OR2A1Q8NGT9 310 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 ELP5Q8TE02 316 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 YIPF4Q9BSR8 244 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 DPH7Q9BTV6 452 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 FSD1LQ9BXM9 530 aa14.38□□□□□ -0.11
CLSTN3-216ENST00000545663 A0A1W2PPV9 198 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 MBD3L4A6NDZ8 208 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 MBD3L5A6NJ08 208 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 C3orf70A6NLC5 250 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 APOL1O14791 398 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 BCKDKO14874 412 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 P2RX6O15547 441 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 DNAJB6O75190 326 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 TYSND1Q2T9J0 566 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 KRTAP24-1Q3LI83 254 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 CATSPEREQ5SY80 951 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 C10orf62Q5T681 223 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 PAOXQ6QHF9 649 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 SEM1Q6ZVN7 128 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 PID1Q7Z2X4 250 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 SPC24Q8NBT2 197 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 NAXEQ8NCW5 288 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 CREB3L4Q8TEY5 395 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 DNAJC1Q96KC8 554 aaKnown RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 GORASP1Q9BQQ3 440 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 ACAT2Q9BWD1 397 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 NHEJ1Q9H9Q4 299 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 HCN3Q9P1Z3 774 aa14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 KLHL8Q9P2G9 620 aaPredicted RBP14.37□□□□□ -0.11
CLSTN3-216ENST00000545663 PKD1L1Q8TDX9 2849 aa14.36□□□□□ -0.11
CLSTN3-216ENST00000545663 A0A0G2JMM0 328 aa14.36□□□□□ -0.11
CLSTN3-216ENST00000545663 A0A1W2PPB8 328 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms