RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PRSS55Q6UWB4 352 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF852Q6ZMS4 543 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 TUBA1AQ71U36 451 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 KCTD9Q7L273 389 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 CREBRFQ8IUR6 639 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 RASGEF1AQ8N9B8 481 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 OR2T12Q8NG77 320 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 GRHL3Q8TE85 626 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 IL17FQ96PD4 163 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 KLHL5Q96PQ7 755 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 TUBA1CQ9BQE3 449 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 SLC5A7Q9GZV3 580 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF350Q9GZX5 532 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 TCF7L2Q9NQB0 619 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 PHPT1Q9NRX4 125 aaPredicted RBP3.44□□□□□ -1.86
SCFD1-207ENST00000544052 VPS18Q9P253 973 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 HBS1LQ9Y450 684 aaKnown RBP3.44□□□□□ -1.86
SCFD1-207ENST00000544052 RIPK3Q9Y572 518 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 AFDNP55196 1824 aaKnown RBP3.44□□□□□ -1.86
SCFD1-207ENST00000544052 SMG6Q86US8 1419 aaKnown RBP3.44□□□□□ -1.86
SCFD1-207ENST00000544052 INSRP06213 1382 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 MAP3K5Q99683 1374 aa3.44□□□□□ -1.86
SCFD1-207ENST00000544052 GREB1LQ9C091 1923 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 IGLV5-45A0A087WSX0 123 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 A0A0A6YYC8 382 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PRAC2D3DTV9 90 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 I3L1I5 382 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KERAO60938 352 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 LUC7L3O95232 432 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 MT-ND3P03897 115 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SNRNP70P08621 437 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 UROSP10746 265 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CCND3P30281 292 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 TAF10Q12962 218 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ODF4Q2M2E3 257 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KIF19Q2TAC6 998 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 C9orf57Q5W0N0 161 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CASC4Q6P4E1 433 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ALKBH5Q6P6C2 394 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 LGI2Q8N0V4 545 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CLYBLQ8N0X4 340 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 EID3Q8N140 333 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 DNAJC22Q8N4W6 341 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SGF29Q96ES7 293 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PSD2Q9BQI7 771 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 LSG1Q9H089 658 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 RETREG1Q9H6L5 497 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 DNAJC17Q9NVM6 304 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 FAF1Q9UNN5 650 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 UBR2Q8IWV8 1755 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SBF1O95248 1867 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CCDC88AQ3V6T2 1871 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 FLT4P35916 1363 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ARFGEF1Q9Y6D6 1849 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 A0A1W2PPI3 338 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PRSS46E5RG02 174 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CCL24O00175 119 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 FLRT2O43155 660 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 RNASEH1O60930 286 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 RPS6KA5O75582 802 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SLC16A8O95907 504 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 STAG3L1P0CL83 205 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CDK4P11802 303 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 MSH3P20585 1137 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ALDH1B1P30837 517 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SERPINB6P35237 376 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KIR2DS3Q14952 304 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 MORF4L2Q15014 288 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KBTBD12Q3ZCT8 623 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 XKR3Q5GH77 459 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PDSS1Q5T2R2 415 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CYP4A22Q5TCH4 519 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF554Q86TJ5 538 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 NUDT13Q86X67 352 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 PLD3Q8IV08 490 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 MAPKAPK5-AS1Q8N8E1 139 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 OR10Q1Q8NGQ4 319 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 OR1J1Q8NGS3 322 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SCARB1Q8WTV0 552 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 HSD17B8Q92506 261 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 IGSF21Q96ID5 467 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 CCDC43Q96MW1 224 aaKnown RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 ZNF583Q96ND8 569 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 C1QTNF4Q9BXJ3 329 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 LAT2Q9GZY6 243 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 SLC7A7Q9UM01 511 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KDM6AO15550 1401 aaPredicted RBP3.43□□□□□ -1.86
SCFD1-207ENST00000544052 DLEC1Q9Y238 1755 aa3.43□□□□□ -1.86
SCFD1-207ENST00000544052 KDRP35968 1356 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 TRAV24A0A0B4J272 114 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 LACTBL1A8MY62 500 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 ARPC2O15144 300 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 SMAD6O43541 496 aaKnown RBP3.42□□□□□ -1.86
SCFD1-207ENST00000544052 BAG2O95816 211 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 GH1P01241 217 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 DGKAP23743 735 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 ART1P52961 327 aa3.42□□□□□ -1.86
SCFD1-207ENST00000544052 YBEYP58557 167 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms