RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 COX7A2P14406 83 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 FUT4P22083 530 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 S100A1P23297 94 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 S100A5P33763 92 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 GSSP48637 474 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 PCYT1AP49585 367 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ACLYP53396 1101 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 LIMK1P53667 647 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 KCNJ10P78508 379 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 MAPK11Q15759 364 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 PLEKHS1Q5SXH7 462 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ANXA8L1Q5VT79 327 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 RNF180Q86T96 592 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 SNX29P2Q8IUI4 249 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ADGRG2Q8IZP9 1017 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ASB11Q8WXH4 323 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 PROX1Q92786 737 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 MRPL9Q9BYD2 267 aaKnown RBP13.27□□□□□ -0.28
VPS33A-208ENST00000543633 RASSF1Q9NS23 344 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 GKN1Q9NS71 199 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 SPASTQ9UBP0 616 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 ENOPH1Q9UHY7 261 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 TSC22D4Q9Y3Q8 395 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 PEX16Q9Y5Y5 336 aa13.27□□□□□ -0.28
VPS33A-208ENST00000543633 GFYI3L273 518 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PLK4O00444 970 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 IGSF6O95976 241 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 GADD45AP24522 165 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 EPHA2P29317 976 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 CSKP41240 450 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 TPTEP56180 551 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PCDH1Q08174 1060 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PTCHD3Q3KNS1 767 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 TPRG1LQ5T0D9 272 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 RASGRP3Q8IV61 690 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PAF1Q8N7H5 531 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 CXorf40BQ96DE9 158 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 EGLN2Q96KS0 407 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 DOHHQ9BU89 302 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 TPT1P8Q9HAU6 139 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 HMX1Q9NP08 348 aaPredicted RBP13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PCDH12Q9NPG4 1184 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
VPS33A-208ENST00000543633 NPAP1Q9NZP6 1156 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 AASSQ9UDR5 926 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 MKLN1Q9UL63 735 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 PPIL1Q9Y3C6 166 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 KLK4Q9Y5K2 254 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 BACE2Q9Y5Z0 518 aa13.27□□□□□ -0.29
VPS33A-208ENST00000543633 SCAMP2O15127 329 aaKnown RBP13.26□□□□□ -0.29
VPS33A-208ENST00000543633 HOXA2O43364 376 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 DIRAS1O95057 198 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 LRATO95237 230 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 MED26O95402 600 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 B3GALT4O96024 378 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 IRF1P10914 325 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 POLR2EP19388 210 aaKnown RBP13.26□□□□□ -0.29
VPS33A-208ENST00000543633 SERPINA4P29622 427 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 CCR7P32248 378 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 CDH18Q13634 790 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 IRF3Q14653 427 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 TIMM50Q3ZCQ8 353 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 ATAD3BQ5T9A4 648 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 SLX4IPQ5VYV7 408 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 STEAP3Q658P3 488 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 PDE12Q6L8Q7 609 aaKnown RBP13.26□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF621Q6ZSS3 439 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 TPRG1Q6ZUI0 275 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF367Q7RTV3 350 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 FAM124AQ86V42 546 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 FAM217AQ8IXS0 508 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 KLHDC8AQ8IYD2 350 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 POC5Q8NA72 575 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 C11orf65Q8NCR3 313 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 VPS37AQ8NEZ2 397 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 TM6SF2Q9BZW4 377 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 BRF2Q9HAW0 419 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 ZBTB20Q9HC78 741 aaPredicted RBP13.26□□□□□ -0.29
VPS33A-208ENST00000543633 ABCB10Q9NRK6 738 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 VPS29Q9UBQ0 182 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 KLHL3Q9UH77 587 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
VPS33A-208ENST00000543633 IFT52Q9Y366 437 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 LYVE1Q9Y5Y7 322 aa13.26□□□□□ -0.29
VPS33A-208ENST00000543633 C1orf226A1L170 272 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 ZBBXA8MT70 800 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 HAT1O14929 419 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 SNPHO15079 494 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 ASNA1O43681 348 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 NEK2P51955 445 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 DEFA1P59665 94 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 DEFA3P59666 94 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 COLEC12Q5KU26 742 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 PRR23CQ6ZRP0 262 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 ZNF675Q8TD23 568 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 C11orf24Q96F05 449 aaPredicted RBP13.25□□□□□ -0.29
VPS33A-208ENST00000543633 TSEN34Q9BSV6 310 aaKnown RBP13.25□□□□□ -0.29
VPS33A-208ENST00000543633 DUSP26Q9BV47 211 aa13.25□□□□□ -0.29
VPS33A-208ENST00000543633 THSD1Q9NS62 852 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms