RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SLC7A5P2Q9GIP4 190 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 PITHD1Q9GZP4 211 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 IQCGQ9H095 443 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 C12orf65Q9H3J6 166 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 NT5DC2Q9H857 520 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 GEMIN8Q9NWZ8 242 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 COPG2Q9UBF2 871 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 PCTPQ9UKL6 214 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 RAXQ9Y2V3 346 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ACACAQ13085 2346 aa16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 MDC1Q14676 2089 aaKnown RBP16.34■□□□□ 0.21
RABGGTA-203ENST00000543002 ACACBO00763 2458 aa16.33■□□□□ 0.21
RABGGTA-203ENST00000543002 TEX51A0A1B0GUA7 166 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 HYKKA2RU49 373 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 SPAG7O75391 227 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 WFS1O76024 890 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 MYL2P10916 166 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 RORAP35398 523 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 AHRP35869 848 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 PRKAA2P54646 552 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 EMP3P54852 163 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 HERVK_113P63132 956 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 GPS2Q13227 327 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 CLN3Q13286 438 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 LAPTM5Q13571 262 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 TGIF1Q15583 401 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 FAM214AQ32MH5 1076 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 ASPGQ86U10 573 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 CACNA2D3Q8IZS8 1091 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 KRT78Q8N1N4 520 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 TM4SF19Q96DZ7 209 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 NAF1Q96HR8 494 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 CNTNAP3BQ96NU0 1288 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 ERVK-6Q9BXR3 956 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 CNTNAP3Q9BZ76 1288 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 DPH1Q9BZG8 443 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 STMN4Q9H169 189 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 IPPKQ9H8X2 491 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 CUTCQ9NTM9 273 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 ZFP69BQ9UJL9 534 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 MID2Q9UJV3 735 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 TPRP12270 2363 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-203ENST00000543002 GOLGA6L10A6NI86 522 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 P2RX6O15547 441 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 TYROBPO43914 113 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 KLK3P07288 261 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 CCNYL3P0C7X3 344 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 CPA3P15088 417 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 CD22P20273 847 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 IMPDH1P20839 514 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 ATP1A2P50993 1020 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 RBBP5Q15291 538 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 HKDC1Q2TB90 917 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 PAGE2BQ5JRK9 111 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 ZNF678Q5SXM1 525 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 TMIGD1Q6UXZ0 262 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 HDXQ7Z353 690 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 DSELQ8IZU8 1212 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 ANKRD53Q8N9V6 530 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 CCDC63Q8NA47 563 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 CAMKVQ8NCB2 501 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 PROKR1Q8TCW9 393 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 TCP10LQ8TDR4 215 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 ZNF483Q8TF39 744 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 SLC13A3Q8WWT9 602 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 L3HYPDHQ96EM0 354 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 NSUN5Q96P11 429 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 TMEM237Q96Q45 408 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 NLNQ9BYT8 704 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 LHX9Q9NQ69 397 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 TXLNGQ9NUQ3 528 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 DHCR7Q9UBM7 475 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 PADI1Q9ULC6 663 aa16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 RUVBL1Q9Y265 456 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-203ENST00000543002 MEN1O00255 615 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 DSCR3O14972 297 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 RRP8O43159 456 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 UGDHO60701 494 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 GSTM2P28161 218 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 STAT5AP42229 794 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 ABHD18Q0P651 414 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 HIST2H2ACQ16777 129 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 MUM1Q2TAK8 710 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 UNC50Q53HI1 259 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 MANEAQ5SRI9 462 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 GARNL3Q5VVW2 1013 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 LIPJQ5W064 366 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 ZNF385CQ66K41 422 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 HIST2H2AA3Q6FI13 130 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 ZNF517Q6ZMY9 492 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 TTLL10Q6ZVT0 673 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 ARHGEF39Q8N4T4 335 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 IL22RA1Q8N6P7 574 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 ARMC2Q8NEN0 867 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 TTLQ8NG68 377 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 SEC16BQ96JE7 1060 aa16.31■□□□□ 0.2
RABGGTA-203ENST00000543002 GBP5Q96PP8 586 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms