RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AMER2Q8N7J2 671 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 AMER3Q8N944 861 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 ANKRD53Q8N9V6 530 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 TTC29Q8NA56 475 aaPredicted RBP9.26□□□□□ -0.93
YBX3-212ENST00000542002 MFSD9Q8NBP5 474 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 OR2Y1Q8NGV0 311 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 APOBEC4Q8WW27 367 aaKnown RBP9.26□□□□□ -0.93
YBX3-212ENST00000542002 SLC5A11Q8WWX8 675 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 ISL2Q96A47 359 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CABS1Q96KC9 395 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 CATSPER2Q96P56 530 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 PAFAH2Q99487 392 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SPSB2Q99619 263 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 SARGQ9BW04 601 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 AICDAQ9GZX7 198 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 ZNF304Q9HCX3 659 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 ACOT9Q9Y305 439 aa9.26□□□□□ -0.93
YBX3-212ENST00000542002 PTRH2Q9Y3E5 179 aaKnown RBP9.26□□□□□ -0.93
YBX3-212ENST00000542002 A0A087WUV0 522 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 A0A0A6YYC8 382 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 LRRC14BA6NHZ5 514 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 FOXO6A8MYZ6 492 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 C9J4A7 227 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 I3L1I5 382 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 UBXN8O00124 270 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 MAP2K7O14733 419 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 OR1F1O43749 312 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 WDR47O94967 919 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 TBX6O95947 436 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 B3GALT4O96024 378 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 TYK2P29597 1187 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 MSH2P43246 934 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 CCR10P46092 362 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 RPS15AP62244 130 aaKnown RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 MAT1AQ00266 395 aaKnown RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 HYAL2Q12891 473 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 ATP1A4Q13733 1029 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 SSPNQ14714 243 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 VWA2Q5GFL6 755 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 TEX35Q5T0J7 233 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 SULT1C3Q6IMI6 304 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 FRA10AC1Q70Z53 315 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 PPP1R32Q7Z5V6 425 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 TMEM151AQ8N4L1 468 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 PDPRQ8NCN5 879 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 OR9A4Q8NGU2 314 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 STAG3L4Q8TBR4 150 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 SLC13A3Q8WWT9 602 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 EXT2Q93063 718 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 RERGQ96A58 199 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 COL26A1Q96A83 441 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 ARHGAP9Q9BRR9 750 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 FAM117AQ9C073 453 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 SLC26A1Q9H2B4 701 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 KLHL31Q9H511 634 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 SOX17Q9H6I2 414 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 NMRAL1Q9HBL8 299 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 GEMIN8Q9NWZ8 242 aaKnown RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 CD274Q9NZQ7 290 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 TLK1Q9UKI8 766 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 ZNF490Q9ULM2 529 aaPredicted RBP9.25□□□□□ -0.93
YBX3-212ENST00000542002 RNF112Q9ULX5 631 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 POLHQ9Y253 713 aa9.25□□□□□ -0.93
YBX3-212ENST00000542002 IGLV3-12A0A075B6K2 115 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 A0A087X1B8 175 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 TRBC2A0A5B9 178 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 OR2W5A6NFC9 320 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ARGFXA6NJG6 315 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 TRIM49D1C9J1S8 452 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 C4orf51C9J302 202 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 KERAO60938 352 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 RFPL1O75677 317 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 STK16O75716 305 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 KLHL2O95198 593 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ALBP02768 609 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 PDGFAP04085 211 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 SHBGP04278 402 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 INHBAP08476 426 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ABHD2P08910 425 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 SBK3P0C264 359 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ZGLP1P0C6A0 271 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 C1GALT1C1LP0DN25 315 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 CD22P20273 847 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 OTX2P32243 289 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 SCTRP47872 440 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 SERPINB8P50452 374 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 REEP5Q00765 189 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 KLC1Q07866 573 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 KCNAB2Q13303 367 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 FAM53BQ14153 422 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 MUM1Q2TAK8 710 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 CDKL4Q5MAI5 379 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 GARNL3Q5VVW2 1013 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ADNP2Q6IQ32 1131 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 PRMT9Q6P2P2 845 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 ADGRD1Q6QNK2 874 aa9.24□□□□□ -0.93
YBX3-212ENST00000542002 VN1R5Q7Z5H4 357 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms