RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, human

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-226	ENST00000541968	ERVK-10	P10266	1014 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	CDH3	P22223	829 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	PON1	P27169	355 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SFN	P31947	248 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	NAGLU	P54802	743 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	MBTD1	Q05BQ5	628 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	DDX39B	Q13838	428 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	DPYSL2	Q16555	572 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SGCB	Q16585	318 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	PNLIPRP3	Q17RR3	467 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	AARD	Q4LEZ3	155 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	TCTE1	Q5JU00	501 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	C6orf136	Q5SQH8	315 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	METAP1D	Q6UB28	335 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	PLXDC2	Q6UX71	529 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RBMS3	Q6XE24	437 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZNF497	Q6ZNH5	498 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	TOM1L2	Q6ZVM7	507 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SYVN1	Q86TM6	617 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	VASH2	Q86V25	355 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	LONP2	Q86WA8	852 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	APLF	Q8IW19	511 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	MFN1	Q8IWA4	741 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	BATF2	Q8N1L9	274 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	BBS5	Q8N3I7	341 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RASGEF1C	Q8N431	466 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	NIPA2	Q8N8Q9	360 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	BANP	Q8N9N5	519 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	TRIM58	Q8NG06	486 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RDM1	Q8NG50	284 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	OR8K3	Q8NH51	312 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	HM13	Q8TCT9	377 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	TEKT4	Q8WW24	435 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	ARHGAP45	Q92619	1136 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	DNASE1L2	Q92874	299 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	NRBF2	Q96F24	287 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	C14orf79	Q96F83	325 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	LRR1	Q96L50	414 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	LINC00615	Q96LM1	132 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RMDN2	Q96LZ7	410 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZNF396	Q96N95	335 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RAD9A	Q99638	391 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	HNRNPAB	Q99729	332 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SSX3	Q99909	188 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SEMA3C	Q99985	751 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	LZTS2	Q9BRK4	669 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	THAP2	Q9H0W7	228 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	PIGM	Q9H3S5	423 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	RANGRF	Q9HD47	186 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	PIH1D3	Q9NQM4	214 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	CRNN	Q9UBG3	495 aa	Predicted RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	DDX25	Q9UHL0	483 aa	Known RBP	4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	SNX6	Q9UNH7	406 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	ACE	P12821	1306 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	TTC41P	Q6P2S7	1318 aa		4.1	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM230A	A0A1W2PPH8	454 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968		A0A1W2PPI3	338 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	DUXA	A6NLW8	204 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ANKRD66	B4E2M5	251 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ATP2A1	O14983	1001 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	CLIC2	O15247	247 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	PDE9A	O76083	593 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	YEATS4	O95619	227 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	KRT19	P08727	400 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	CD48	P09326	243 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM58BP	P0C7Q3	252 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	THRB	P10828	461 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	SKIL	P12757	684 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	AREG	P15514	252 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ADRA2C	P18825	462 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ITIH1	P19827	911 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	MSH3	P20585	1137 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ACHE	P22303	614 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	DNAJB1	P25685	340 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	PSMA5	P28066	241 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	HSD17B2	P37059	387 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	PRCP	P42785	496 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ABR	Q12979	859 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	KIR2DS3	Q14952	304 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	HADH	Q16836	314 aa	Known RBP	4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	PCGF3	Q3KNV8	242 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	FBXO48	Q5FWF7	155 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	NSUN5P2	Q63ZY6	315 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM91A1	Q658Y4	838 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	KRT39	Q6A163	491 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	LCN10	Q6JVE6	187 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	NOTCH2NL	Q7Z3S9	236 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	CFAP206	Q8IYR0	622 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	GBGT1	Q8N5D6	347 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	BBOF1	Q8ND07	529 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	DBF4B	Q8NFT6	615 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	OR8K5	Q8NH50	307 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	EXOC6	Q8TAG9	804 aa		4.09	□□□□□ -1.75
RAP1B-226	ENST00000541968	MIPOL1	Q8TD10	442 aa		4.09	□□□□□ -1.75

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