RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HOXA6P31267 233 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SHMT2P34897 504 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ATP5C1P36542 298 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 POLR2IP36954 125 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 DCTP40126 519 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 MAGEA2P43356 314 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 LIMK1P53667 647 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 GP2P55259 537 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 CDKN2DP55273 166 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 TPTEP56180 551 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 UFM1P61960 85 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ELOAQ14241 798 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 TAF1AQ15573 450 aaPredicted RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 MEP1AQ16819 746 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PERM1Q5SV97 790 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 KIAA1614Q5VZ46 1190 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CYP20A1Q6UW02 462 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SPESP1Q6UW49 350 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SYT13Q7L8C5 426 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PAGE2Q7Z2X7 111 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 TAC4Q86UU9 113 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CCDC103Q8IW40 242 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 RYBPQ8N488 228 aaPredicted RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 SPATA6LQ8N4H0 392 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 C1orf52Q8N6N3 182 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 POC5Q8NA72 575 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ZNF540Q8NDQ6 660 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 LILRB4Q8NHJ6 448 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 METTL6Q8TCB7 284 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ANKRD49Q8WVL7 239 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PIGKQ92643 395 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 KCNJ9Q92806 393 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 PTERQ96BW5 349 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SLC39A13Q96H72 371 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 METTL2AQ96IZ6 378 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 CELF6Q96J87 481 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 LOXL4Q96JB6 756 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 ZC3H10Q96K80 434 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 FCRL2Q96LA5 508 aaPredicted RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 ZNF583Q96ND8 569 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 MBOAT4Q96T53 435 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CSF3RQ99062 836 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 NXF2Q9GZY0 626 aaKnown RBP10.08□□□□□ -0.8
CHFR-219ENST00000541341 HOXD1Q9GZZ0 328 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 C3orf14Q9HBI5 128 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 DYRK4Q9NR20 520 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 CD274Q9NZQ7 290 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SLC2A6Q9UGQ3 507 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 TRAPPC4Q9Y296 219 aa10.08□□□□□ -0.8
CHFR-219ENST00000541341 SPEGQ15772 3267 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 A0A075B6Q4 140 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 E9PAM4 449 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 LEFTY2O00292 366 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 KMOO15229 486 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ARHGEF9O43307 516 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 LDB2O43679 373 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 AIREO43918 545 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 CREG1O75629 220 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 CLIC3O95833 236 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 DLGAP3O95886 979 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PCNAP12004 261 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 BMP4P12644 408 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 NCK1P16333 377 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PSMB9P28065 219 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ETFBP38117 255 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 OPRD1P41143 372 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PTGER3P43115 390 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 CTSKP43235 329 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 MAPK8P45983 427 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 RPS5P46782 204 aaKnown RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 GNPDA1P46926 289 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 DIO3P55073 304 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 RAB25P57735 213 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 OR4D2P58180 307 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 RING1Q06587 406 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 SELENBP1Q13228 472 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 OLIG2Q13516 323 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 SERINC3Q13530 473 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ZNF235Q14590 738 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 NR6A1Q15406 480 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 IMPG1Q17R60 797 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 RUNDC3AQ59EK9 446 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ARMCX4Q5H9R4 360 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PAGE3Q5JUK9 113 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 AGAP6Q5VW22 663 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ALG1LQ6GMV1 187 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 OR2T5Q6IEZ7 315 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 TMEM92Q6UXU6 159 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 PIWIL3Q7Z3Z3 882 aaKnown RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 SERPINA11Q86U17 422 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 C12orf40Q86WS4 652 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 LYSMD2Q8IV50 215 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 TMEFF1Q8IYR6 380 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 ZNF548Q8NEK5 533 aaPredicted RBP10.07□□□□□ -0.8
CHFR-219ENST00000541341 DEFB124Q8NES8 71 aa10.07□□□□□ -0.8
CHFR-219ENST00000541341 MDGA1Q8NFP4 955 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms