RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 A0A1B0GX78 115 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 H3BQF6 201 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 E2F3O00716 465 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 OR1F1O43749 312 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 TIAF1O95411 115 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 MYL2P10916 166 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 RORAP35398 523 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 HNF4AP41235 474 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 STAT5AP42229 794 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 SCTRP47872 440 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 ASPHQ12797 758 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 GTF2H2Q13888 395 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 FAM53BQ14153 422 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 C18orf21Q32NC0 220 aaPredicted RBP17.93■□□□□ 0.46
VPS33A-205ENST00000541169 CATSPEREQ5SY80 951 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 FRMPD2BQ6IN97 320 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 GTF2H2CQ6P1K8 395 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 DSELQ8IZU8 1212 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 TEX9Q8N6V9 391 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 BANPQ8N9N5 519 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 GALNT6Q8NCL4 622 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 REPS1Q96D71 796 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 TM4SF19Q96DZ7 209 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 PHF21BQ96EK2 531 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 LHX9Q9NQ69 397 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 CUTCQ9NTM9 273 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 SH2B3Q9UQQ2 575 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 SSUH2Q9Y2M2 353 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 SDK2Q58EX2 2172 aa17.93■□□□□ 0.46
VPS33A-205ENST00000541169 LOC105369274A0A096LPK9 316 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 LOC102723532A0A0G2JNH3 316 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 A8MT66 165 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 DSCR3O14972 297 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 KLK10O43240 276 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 HCRTR1O43613 425 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 PLIN3O60664 434 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 WFS1O76024 890 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 ONECUT2O95948 504 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 RECKO95980 971 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 NTRK1P04629 796 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 EIF2S1P05198 315 aaKnown RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 IMPDH1P20839 514 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 EEF1DP29692 281 aaKnown RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 GCGRP47871 477 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 AGTR2P50052 363 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 PRKAA2P54646 552 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 DCDP81605 110 aaKnown RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 RGS1Q08116 209 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 CHIT1Q13231 466 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 CLN3Q13286 438 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 CASP8Q14790 479 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 ZYG11AQ6WRX3 759 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 HDXQ7Z353 690 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 ASPGQ86U10 573 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 OR4N4Q8N0Y3 316 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 SLC13A3Q8WWT9 602 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 SREK1Q8WXA9 508 aaKnown RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 L3HYPDHQ96EM0 354 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 CCNL2Q96S94 520 aaPredicted RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 GEMIN8Q9NWZ8 242 aaKnown RBP17.92■□□□□ 0.46
VPS33A-205ENST00000541169 RAXQ9Y2V3 346 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 PLLPQ9Y342 182 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 TSC22D4Q9Y3Q8 395 aa17.92■□□□□ 0.46
VPS33A-205ENST00000541169 MDC1Q14676 2089 aaKnown RBP17.91■□□□□ 0.46
VPS33A-205ENST00000541169 C9J4A7 227 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 MLYCDO95822 493 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 OTCP00480 354 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 PROCP04070 461 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 RAB40ALP0C0E4 278 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 SBK3P0C264 359 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 H2AFXP16104 143 aaPredicted RBP17.91■□□□□ 0.46
VPS33A-205ENST00000541169 ZNF28P17035 718 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 BCL6P41182 706 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 TNFAIP8L3Q5GJ75 292 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 TIPARPQ7Z3E1 657 aaKnown RBP17.91■□□□□ 0.46
VPS33A-205ENST00000541169 C4orf33Q8N1A6 199 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 ZSCAN1Q8NBB4 408 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 NT5CQ8TCD5 201 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 PPP4R1Q8TF05 950 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 ESAMQ96AP7 390 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 CNTNAP3BQ96NU0 1288 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 NTMT1Q9BV86 223 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 CNTNAP3Q9BZ76 1288 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 IPPKQ9H8X2 491 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 ACTR8Q9H981 624 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 VIPAS39Q9H9C1 493 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 CLK4Q9HAZ1 481 aaKnown RBP17.91■□□□□ 0.46
VPS33A-205ENST00000541169 PCTPQ9UKL6 214 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 PCDHGA6Q9Y5G7 932 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 PCDHGA11Q9Y5H2 935 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 SLC22A7Q9Y694 548 aa17.91■□□□□ 0.46
VPS33A-205ENST00000541169 FEZF1A0PJY2 475 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 ANKDD1BA6NHY2 528 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 DLX3O60479 287 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 SERPINA6P08185 405 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 RPS17P08708 135 aaKnown RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 CPA3P15088 417 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 DNAJB13P59910 316 aa17.9■□□□□ 0.46
VPS33A-205ENST00000541169 STXBP1P61764 594 aaKnown RBP17.9■□□□□ 0.46
VPS33A-205ENST00000541169 RPS15P62841 145 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms