RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 HHIPL1Q96JK4 782 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 C8orf48Q96LL4 319 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 SNX18Q96RF0 628 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ATOH8Q96SQ7 321 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 C1QTNF7Q9BXJ2 289 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 RIBC2Q9H4K1 309 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 DUSP21Q9H596 190 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 TFB2MQ9H5Q4 396 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 C11orf49Q9H6J7 331 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 AGO3Q9H9G7 860 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZDHHC4Q9NPG8 344 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 NPAP1Q9NZP6 1156 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 H2AFY2Q9P0M6 372 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 KCNN3Q9UGI6 736 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 PCDHB14Q9Y5E9 798 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 SPTBN1Q01082 2364 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 A0A0U1RQS6 177 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 A0A1B0GTL3 188 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 PITPNM1O00562 1244 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 HAT1O14929 419 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 FFAR2O15552 330 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 TSC22D2O75157 780 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 PAPSS2O95340 614 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 MED26O95402 600 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 CATP04040 527 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 CLTBP09497 229 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ELFN1P0C7U0 828 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZNF37AP17032 561 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 CD6P30203 668 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 OR3A3P47888 321 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 GATMP50440 423 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 CLCN7P51798 805 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 CXCR4P61073 352 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 RPS7P62081 194 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZNF45Q02386 682 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 IRF3Q14653 427 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 GPNMBQ14956 572 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 CACHD1Q5VU97 1274 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 TXNDC8Q6A555 127 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 PM20D1Q6GTS8 502 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 AGMOQ6ZNB7 445 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 GDPD3Q7L5L3 318 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ARHGAP12Q8IWW6 846 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 GPR156Q8NFN8 814 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 OR8J3Q8NGG0 315 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 PROKR1Q8TCW9 393 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 JPH3Q8WXH2 748 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 HERVK_113Q902F9 699 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 MARC2Q969Z3 335 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZNF419Q96HQ0 510 aaPredicted RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZNF599Q96NL3 588 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 REXO4Q9GZR2 422 aaKnown RBP5.08□□□□□ -1.6
PROM1-220ENST00000540805 MCOLN1Q9GZU1 580 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 EXO5Q9H790 373 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ZNF556Q9HAH1 456 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 ACOT13Q9NPJ3 140 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 UTS2RQ9UKP6 389 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 NEU3Q9UQ49 428 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 TTC28Q96AY4 2481 aa5.08□□□□□ -1.6
PROM1-220ENST00000540805 OR51F1A6NGY5 319 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR6C75A6NL08 312 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ARNTLO00327 626 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 AIREO43918 545 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MAFKO60675 156 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 MRPS14O60783 128 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 KERAO60938 352 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SEC22BO75396 215 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SCELO95171 688 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 FCER2P06734 321 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 RPS17P08708 135 aaKnown RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 CYP4B1P13584 511 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 UGT2B10P36537 528 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TGFBR2P37173 567 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GUCA1AP43080 201 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 CXCR3P49682 368 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR2B6P58173 313 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CNTN1Q12860 1018 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 CPSF6Q16630 551 aaKnown RBP eCLIP5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZFP69Q49AA0 526 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TIGD5Q53EQ6 642 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 C6orf136Q5SQH8 315 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GALNT5Q7Z7M9 940 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 TMEM179BQ7Z7N9 219 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SYVN1Q86TM6 617 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 NPAS4Q8IUM7 802 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 NRSN1Q8IZ57 195 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 AMER2Q8N7J2 671 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 ZNF548Q8NEK5 533 aaPredicted RBP5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR6F1Q8NGZ6 308 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 OR2T11Q8NH01 316 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 STAG3L4Q8TBR4 150 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SH3RF2Q8TEC5 729 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 HMGB4Q8WW32 186 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PIK3R3Q92569 461 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 GTF2H4Q92759 462 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 SLC38A4Q969I6 547 aa5.07□□□□□ -1.6
PROM1-220ENST00000540805 PCED1BQ96HM7 432 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms