RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MAP7Q14244 749 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SLBPQ14493 270 aaKnown RBP eCLIP14.8□□□□□ -0.04
DDB1-218ENST00000540784 MANEAQ5SRI9 462 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ZNF678Q5SXM1 525 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 PRAMEF9Q5VWM5 478 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 TMIGD1Q6UXZ0 262 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 TIPARPQ7Z3E1 657 aaKnown RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 ASPGQ86U10 573 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 DTX1Q86Y01 620 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ESX1Q8N693 406 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 KDF1Q8NAX2 398 aaPredicted RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 SLC38A9Q8NBW4 561 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 CAMKVQ8NCB2 501 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ARMC2Q8NEN0 867 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SNIP1Q8TAD8 396 aaKnown RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 SLC13A3Q8WWT9 602 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ZCCHC14Q8WYQ9 949 aaKnown RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 TM4SF19Q96DZ7 209 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 NAF1Q96HR8 494 aaKnown RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 LRFN5Q96NI6 719 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 EFCAB11Q9BUY7 163 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 C1QTNF3Q9BXJ4 246 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ACTR8Q9H981 624 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 VIPAS39Q9H9C1 493 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SSU72Q9NP77 194 aaKnown RBP14.8□□□□□ -0.04
DDB1-218ENST00000540784 KCNK9Q9NPC2 374 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 TXLNGQ9NUQ3 528 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 WDR70Q9NW82 654 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 PCTPQ9UKL6 214 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 SRPK3Q9UPE1 567 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 ACTL7BQ9Y614 415 aa14.8□□□□□ -0.04
DDB1-218ENST00000540784 AKAP13Q12802 2813 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 UQCRHLA0A096LP55 91 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 TEX51A0A1B0GUA7 166 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 AGPSO00116 658 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 MEN1O00255 615 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 RRP8O43159 456 aaKnown RBP14.79□□□□□ -0.04
DDB1-218ENST00000540784 TYROBPO43914 113 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 DLGAP3O95886 979 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 SERPIND1P05546 499 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 UQCRHP07919 91 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 AGXTP21549 392 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 ARL1P40616 181 aaPredicted RBP14.79□□□□□ -0.04
DDB1-218ENST00000540784 ATP1A2P50993 1020 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 EMP3P54852 163 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 CDH13P55290 713 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 DNAJB13P59910 316 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 TGIF1Q15583 401 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 PRTGQ2VWP7 1150 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 UNC50Q53HI1 259 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 LIPJQ5W064 366 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 RHBDD2Q6NTF9 364 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 TTLL10Q6ZVT0 673 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 CACNA2D3Q8IZS8 1091 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 TRPV3Q8NET8 790 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 TTLQ8NG68 377 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 ZNF483Q8TF39 744 aaPredicted RBP14.79□□□□□ -0.04
DDB1-218ENST00000540784 KCNE4Q8WWG9 221 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 NKD1Q969G9 470 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 UBE2E3Q969T4 207 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 FAM111AQ96PZ2 611 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 DPH1Q9BZG8 443 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 SPNS1Q9H2V7 528 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 SYNPO2LQ9H987 977 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
DDB1-218ENST00000540784 CUTCQ9NTM9 273 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 OXSMQ9NWU1 459 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 SLC17A7Q9P2U7 560 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 COPG2Q9UBF2 871 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 NDOR1Q9UHB4 597 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 ZFP69BQ9UJL9 534 aa14.79□□□□□ -0.04
DDB1-218ENST00000540784 ZNF490Q9ULM2 529 aaPredicted RBP14.79□□□□□ -0.04
DDB1-218ENST00000540784 ANKDD1BA6NHY2 528 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 OR7A17O14581 309 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 UGDHO60701 494 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 CLDN9O95484 217 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 STATHP02808 62 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 RPS17P08708 135 aaKnown RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 SLC35G6P0C7Q6 338 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 EIF2S3P41091 472 aaKnown RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 HNF4AP41235 474 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 CCNG1P51959 295 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 CLCQ05315 142 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 ABHD18Q0P651 414 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 PWP1Q13610 501 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 RBBP7Q16576 425 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 NDUFA9Q16795 377 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 MUM1Q2TAK8 710 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 HKDC1Q2TB90 917 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 CFAP157Q5JU67 520 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 C1orf189Q5VU69 101 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 GARNL3Q5VVW2 1013 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 MED27Q6P2C8 311 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 VN1R4Q7Z5H5 301 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 MILR1Q7Z6M3 343 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 PROSER1Q86XN7 944 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 MYLK4Q86YV6 388 aaPredicted RBP14.78□□□□□ -0.04
DDB1-218ENST00000540784 IL22RA1Q8N6P7 574 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 CCNYL1Q8N7R7 359 aa14.78□□□□□ -0.04
DDB1-218ENST00000540784 ANKRD53Q8N9V6 530 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms