RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 SAMD15Q9P1V8 674 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 MED16Q9Y2X0 877 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 DHRS7Q9Y394 339 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 COMMD10Q9Y6G5 202 aa11.35□□□□□ -0.59
CBX3P4-202ENST00000540428 CTAGE9A4FU28 777 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 SLC19A2O60779 497 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 SEC24DO94855 1032 aaPredicted RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 SYF2O95926 243 aaKnown RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 FGGP02679 453 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 MLNP12872 115 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 HTR1EP28566 365 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 IMPA1P29218 277 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 BCL6P41182 706 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 XCR1P46094 333 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 KCNJ1P48048 391 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 DHX34Q14147 1143 aaKnown RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 EXT1Q16394 746 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 MEP1AQ16819 746 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 ZXDCQ2QGD7 858 aaPredicted RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 BTBD16Q32M84 506 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 MINDY4Q4G0A6 757 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 KRTCAP3Q53RY4 240 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 ACER2Q5QJU3 275 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 TMEM214Q6NUQ4 689 aaKnown RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 CASC4Q6P4E1 433 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 LANCL3Q6ZV70 420 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 PLD3Q8IV08 490 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 OR9A4Q8NGU2 314 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 M1APQ8TC57 530 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 MMP25Q9NPA2 562 aa11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 CCDC177Q9NQR7 707 aaPredicted RBP11.34□□□□□ -0.59
CBX3P4-202ENST00000540428 CSMD1Q96PZ7 3565 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 IGHV3-20A0A0C4DH32 117 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ASPDHA6ND91 283 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 SDR42E2A6NKP2 422 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 A8MUI8 341 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 TTI1O43156 1089 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 AVILO75366 819 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 POU3F2P20265 443 aaPredicted RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 IL10P22301 178 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 SMSP52788 366 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 SNRPNP63162 240 aaKnown RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CUL1Q13616 776 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 TUBA3CQ13748 450 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 THOC5Q13769 683 aaKnown RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 LRRC8EQ6NSJ5 796 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ZNF549Q6P9A3 640 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 Q6ZPB1 254 aaPredicted RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ZNF662Q6ZS27 426 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 UBE2R2Q712K3 238 aaPredicted RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ANKRD37Q7Z713 158 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CAND1Q86VP6 1230 aaKnown RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 LGI4Q8N135 537 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 BEST3Q8N1M1 668 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CAMKVQ8NCB2 501 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 MDS2Q8NDY4 140 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 PLPP5Q8NEB5 264 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CD200R1Q8TD46 325 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CALML6Q8TD86 181 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ZNF669Q96BR6 464 aaPredicted RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 TM4SF19Q96DZ7 209 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 SCMH1Q96GD3 660 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 GPR137Q96N19 417 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 GPR21Q99679 349 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 KCNK13Q9HB14 408 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ANKHQ9HCJ1 492 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 ZNF835Q9Y2P0 537 aa11.33□□□□□ -0.6
CBX3P4-202ENST00000540428 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 ZCWPW2A0A1B0GU75 182 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 COX6B1P14854 86 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 IL1RNP18510 177 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 CCND1P24385 295 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 TBPL1P62380 186 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 CSNK1G2P78368 415 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 PMP22Q01453 160 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 GPS1Q13098 491 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 CTBP1Q13363 440 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 C3AR1Q16581 482 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 PRSS41Q7RTY9 318 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 ASPGQ86U10 573 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 DENND6AQ8IWF6 608 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC5A8Q8N695 610 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 HORMAD2Q8N7B1 307 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 AMER2Q8N7J2 671 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 TMEM178AQ8NBL3 297 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 MCUQ8NE86 351 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 MAGED4Q96JG8 741 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 OR1F2PQ96R84 312 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 LPAR4Q99677 370 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 UTP23Q9BRU9 249 aaKnown RBP11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 FBXO6Q9NRD1 293 aaPredicted RBP11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 HCN3Q9P1Z3 774 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 SH3BGRL2Q9UJC5 107 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 SLC22A7Q9Y694 548 aa11.32□□□□□ -0.6
CBX3P4-202ENST00000540428 MYO7BQ6PIF6 2116 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms