RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 SEC14L5O43304 696 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 HRO43593 1189 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 WBP4O75554 376 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 TIMP1P01033 207 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SELLP14151 372 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CD19P15391 556 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CSF2RAP15509 400 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RGS6P49758 472 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RAB25P57735 213 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 DSC1Q08554 894 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 VEPH1Q14D04 833 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.18□□□□□ -0.946e-7■■■■□ 21
CTNNA1-243ENST00000540387 ZNF667Q5HYK9 610 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PDSS1Q5T2R2 415 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 C9orf57Q5W0N0 161 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GPRIN3Q6ZVF9 776 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 LIMS2Q7Z4I7 341 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SNX20Q7Z614 316 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ZSWIM9Q86XI8 627 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SCUBE3Q8IX30 993 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RBFAQ8N0V3 343 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ATAD1Q8NBU5 361 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 HEXDCQ8WVB3 486 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC5A11Q8WWX8 675 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 USP7Q93009 1102 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CCDC126Q96EE4 140 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC47A1Q96FL8 570 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CELF6Q96J87 481 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RBM14Q96PK6 669 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GFM1Q96RP9 751 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 COPS4Q9BT78 406 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 LHX5Q9H2C1 402 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ESRP2Q9H6T0 727 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ACTR8Q9H981 624 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CLCA3PQ9Y6N3 262 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 TRIP11Q15643 1979 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SEC22BO75396 215 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 IPO13O94829 963 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SNAPINO95295 136 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 EOMESO95936 686 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PDGFRAP16234 1089 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GGT1P19440 569 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GPC1P35052 558 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RAB10P61026 200 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ETFDHQ16134 617 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 HSD17B12Q53GQ0 312 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SPNS2Q8IVW8 549 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ADHFE1Q8IWW8 467 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 CDYL2Q8N8U2 506 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF675Q8TD23 568 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 DNASE1L2Q92874 299 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 FUBP1Q96AE4 644 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PHF21BQ96EK2 531 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 TEX37Q96LM6 180 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 RBP7Q96R05 134 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 PAAF1Q9BRP4 392 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 MLPHQ9BV36 600 aaPredicted RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SNRNP25Q9BV90 132 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SORBS1Q9BX66 1292 aaKnown RBP9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 REG4Q9BYZ8 158 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC19A3Q9BZV2 496 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 NIF3L1Q9GZT8 377 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 GSTO2Q9H4Y5 243 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 KCMF1Q9P0J7 381 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 KIF17Q9P2E2 1029 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 ERVW-1Q9UQF0 538 aa9.18□□□□□ -0.94
CTNNA1-243ENST00000540387 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 A0A1W2PPL8 197 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 PIRO00625 290 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC30A4O14863 429 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 KIAA0355O15063 1070 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 KPNA5O15131 536 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 VPS26AO75436 327 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 EEDO75530 441 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 MPC2O95563 127 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 PLATP00750 562 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ARSBP15848 533 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ASPAP45381 313 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 KCNQ1P51787 676 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 CRISP3P54108 245 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 PLIN5Q00G26 463 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ELP6Q0PNE2 266 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 PTPRRQ15256 657 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 GLYR1Q49A26 553 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 CLLU1OSQ5K130 101 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 IL31Q6EBC2 164 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 FAM131AQ6UXB0 335 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.17□□□□□ -0.948e-7■■■□□ 16
CTNNA1-243ENST00000540387 CHMP1BQ7LBR1 199 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 RNF130Q86XS8 419 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 PHYKPLQ8IUZ5 450 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 SLC37A3Q8NCC5 494 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 CEP76Q8TAP6 659 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ZFPM2Q8WW38 1151 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ISG20Q96AZ6 181 aaKnown RBP9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 SENP8Q96LD8 212 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 LGMNQ99538 433 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 BARHL1Q9BZE3 327 aa9.17□□□□□ -0.94
CTNNA1-243ENST00000540387 SDHAF2Q9NX18 166 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms