RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SH3YL1Q96HL8 342 aaPredicted RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 IL17FQ96PD4 163 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 YTHDF1Q9BYJ9 559 aaKnown RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SLC29A3Q9BZD2 475 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 ZBTB20Q9HC78 741 aaPredicted RBP13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SACM1LQ9NTJ5 587 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 C5AR2Q9P296 337 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 SLC25A13Q9UJS0 675 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 STOML2Q9UJZ1 356 aa13.19□□□□□ -0.3
BNIP3-202ENST00000540159 GRXCR2A6NFK2 248 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 K7ESM1 405 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 KPNA3O00505 521 aaPredicted RBP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TYRP14679 529 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 POU1F1P28069 291 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 SLC6A12P48065 614 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 SEPHS1P49903 392 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CRYBA2P53672 197 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 IFITM3Q01628 133 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 GRSF1Q12849 480 aaKnown RBP eCLIP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CLCA4Q14CN2 919 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF385BQ569K4 471 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 SHQ1Q6PI26 577 aaKnown RBP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 LRRC70Q7Z2Q7 622 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 PAGE2Q7Z2X7 111 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CLIP4Q8N3C7 705 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 OR4A15Q8NGL6 344 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 UBTD2Q8WUN7 234 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 GTPBP3Q969Y2 492 aaKnown RBP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TSEN34Q9BSV6 310 aaKnown RBP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 SNX8Q9Y5X2 465 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TRAV19A0A0A6YYK7 116 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CRISP3P54108 245 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CDH12P55289 794 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TEAD2Q15562 447 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 CPTPQ5TA50 214 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM220Q6QAJ8 160 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 GDPD4Q6W3E5 623 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 DDX53Q86TM3 631 aaKnown RBP13.18□□□□□ -0.3
BNIP3-202ENST00000540159 P2RY8Q86VZ1 359 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 RAD18Q9NS91 495 aa13.18□□□□□ -0.3
BNIP3-202ENST00000540159 HLA-EP13747 358 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 PRPS1L1P21108 318 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 CSNK1DP48730 415 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 MADCAM1Q13477 382 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 CAMK2GQ13555 558 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 INAQ16352 499 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 LYPLAL1Q5VWZ2 237 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 KLHL17Q6TDP4 642 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SZRD1Q7Z422 152 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 DSG4Q86SJ6 1040 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 TRAPPC5Q8IUR0 188 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 CFAP206Q8IYR0 622 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 RASGEF1AQ8N9B8 481 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 PSMA8Q8TAA3 256 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 ASZ1Q8WWH4 475 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 OTUB1Q96FW1 271 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 FEVQ99581 238 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SPNS1Q9H2V7 528 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SCN3BQ9NY72 215 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 TMEM9Q9P0T7 183 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 PITPNM1O00562 1244 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SGTAO43765 313 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SCN2BO60939 215 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 POP4O95707 220 aaKnown RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 C6orf47O95873 294 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 C8GP07360 202 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 DBTP11182 482 aaKnown RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 PABPC1P11940 636 aaKnown RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 JUPP14923 745 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 CSF2RAP15509 400 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 CD36P16671 472 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 JUNBP17275 347 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 HPCAL1P37235 193 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 NOGQ13253 232 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 C11orf74Q86VG3 221 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 P3H2Q8IVL5 708 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 RNF168Q8IYW5 571 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 ZNF296Q8WUU4 475 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 TAMM41Q96BW9 452 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 TCF25Q9BQ70 676 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 C6orf62Q9GZU0 229 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 SPG21Q9NZD8 308 aa13.17□□□□□ -0.3
BNIP3-202ENST00000540159 STOX2Q9P2F5 926 aaPredicted RBP13.17□□□□□ -0.3
BNIP3-202ENST00000540159 A0A0G2JN53 185 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 CTSLP07711 333 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 DNAJA1P31689 397 aaKnown RBP13.16□□□□□ -0.3
BNIP3-202ENST00000540159 HNF4AP41235 474 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 HBA1P69905 142 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SLC13A2Q13183 592 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 SPRED2Q7Z698 418 aa13.16□□□□□ -0.3
BNIP3-202ENST00000540159 PLPP6Q8IY26 295 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms