RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 DUSP26Q9BV47 211 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ZDHHC4Q9NPG8 344 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 RASSF1Q9NS23 344 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SH3BP4Q9P0V3 963 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 BAG5Q9UL15 447 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SAMD4AQ9UPU9 718 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TMED5Q9Y3A6 229 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CORINQ9Y5Q5 1042 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GNG14A0A1W2PPG7 69 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SLC16A5O15375 505 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 PSIP1O75475 530 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CYP17A1P05093 508 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 FABP3P05413 133 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CISD3P0C7P0 127 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 MMP12P39900 470 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CRYBA2P53672 197 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GP2P55259 537 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 MC1RQ01726 317 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 GRSF1Q12849 480 aaKnown RBP eCLIP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM115Q12893 351 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 MYBPC3Q14896 1274 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF385BQ569K4 471 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 LIPJQ5W064 366 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SHQ1Q6PI26 577 aaKnown RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 DPPA4Q7L190 304 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TMPRSS11BQ86T26 416 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 HIPK1Q86Z02 1210 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TRAM1L1Q8N609 369 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 OR4K1Q8NGD4 311 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 HUS1BQ8NHY5 278 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 BTN2A2Q8WVV5 523 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 AP2M1Q96CW1 435 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 RDH12Q96NR8 316 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 NODALQ96S42 347 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TUBA1CQ9BQE3 449 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 TPT1P8Q9HAU6 139 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 SPATA6Q9NWH7 488 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 NFKBIL1Q9UBC1 381 aaPredicted RBP11.11□□□□□ -0.63
C11orf54-214ENST00000540113 IL36AQ9UHA7 158 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 RAPGEFL1Q9UHV5 662 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
C11orf54-214ENST00000540113 KPNA3O00505 521 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 NPC1O15118 1278 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SPINT1O43278 529 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ANGPTL1O95841 491 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 HLA-EP13747 358 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 MAGEA2P43356 314 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PSMD7P51665 324 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 BMXP51813 675 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 RAD23AP54725 363 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 EMX1Q04741 257 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 STARD3Q14849 445 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 DHCR24Q15392 516 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF284Q2VY69 593 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF805Q5CZA5 627 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 GALNT18Q6P9A2 607 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 NEK10Q6ZWH5 1172 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PARS2Q7L3T8 475 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 B3GNT8Q7Z7M8 397 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SERPINA11Q86U17 422 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 HORMAD1Q86X24 394 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 NAGSQ8N159 534 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF557Q8N988 423 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 DRAXINQ8NBI3 349 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PIK3C3Q8NEB9 887 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 OR7G3Q8NG95 312 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 FNDC8Q8TC99 324 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 BADQ92934 168 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 GLYATL1Q969I3 302 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ZNF707Q96C28 371 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 RAD9AQ99638 391 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 GULP1Q9UBP9 304 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SAMHD1Q9Y3Z3 626 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PRKAB1Q9Y478 270 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SNX5Q9Y5X3 404 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 TCF20Q9UGU0 1960 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 NUP210Q8TEM1 1887 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 TOR1BO14657 336 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SCAMP2O15127 329 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 AP2A2O94973 939 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 BCL10O95999 233 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 ELFN1P0C7U0 828 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 GPX2P18283 190 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 EN2P19622 333 aaPredicted RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 PCMT1P22061 227 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 HOXA9P31269 272 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 TRPC1P48995 793 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 TMBIM6P55061 237 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 SRSF11Q05519 484 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 FPGSQ05932 587 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 CSTF3Q12996 717 aaKnown RBP11.1□□□□□ -0.63
C11orf54-214ENST00000540113 COX20Q5RI15 118 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 TMEM240Q5SV17 173 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 CPTPQ5TA50 214 aa11.1□□□□□ -0.63
C11orf54-214ENST00000540113 CRTC3Q6UUV7 619 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms