RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DYRK1BQ9Y463 629 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 KCNE2Q9Y6J6 123 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC88CQ9P219 2028 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 PKD1L2Q7Z442 2459 aa6.67□□□□□ -1.34
LPCAT3-209ENST00000540060 ATMQ13315 3056 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 KCNE1BA0A087WTH5 132 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 A0A087WV48 116 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TRBC2A0A5B9 178 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 FEZF1A0PJY2 475 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 H0YGG7 62 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 K7EPI3 171 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 COPEO14579 308 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TERTO14746 1132 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF749O43361 778 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PLIN3O60664 434 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SRPX2O60687 465 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SMIM24O75264 130 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 MED26O95402 600 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PROCP04070 461 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 NTRK1P04629 796 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 RPS17P08708 135 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 H2AFXP16104 143 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CD22P20273 847 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 VARSP26640 1264 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 EEF1DP29692 281 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CRHR1P34998 444 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 GRK3P35626 688 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ARF3P61204 181 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PCDH1Q08174 1060 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 GPS2Q13227 327 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 GRM7Q14831 915 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TGIF1Q15583 401 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 HKDC1Q2TB90 917 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PRTGQ2VWP7 1150 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CCDC153Q494R4 210 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TNFAIP8L3Q5GJ75 292 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 WASHC2DQ5SRD0 308 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CEP85LQ5SZL2 805 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ATG9BQ674R7 924 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 RHBDD2Q6NTF9 364 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 METTL2BQ6P1Q9 378 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TLDC1Q6P9B6 456 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 NXPE4Q6UWF7 544 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 C6orf15Q6UXA7 325 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF517Q6ZMY9 492 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SPACA3Q8IXA5 215 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SRRM1Q8IYB3 904 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CACNA2D3Q8IZS8 1091 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 DSELQ8IZU8 1212 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ARHGEF39Q8N4T4 335 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ESX1Q8N693 406 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF655Q8N720 491 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CSNK1A1LQ8N752 337 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 BANPQ8N9N5 519 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SNX31Q8N9S9 440 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ANKRD53Q8N9V6 530 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TTC29Q8NA56 475 aaPredicted RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZNF740Q8NDX6 193 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CLIP3Q96DZ5 547 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TM4SF19Q96DZ7 209 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PHF21BQ96EK2 531 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 THAP11Q96EK4 314 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 NAF1Q96HR8 494 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 C10orf90Q96M02 699 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TMEM237Q96Q45 408 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 C1QTNF3Q9BXJ4 246 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 CAPS2Q9BXY5 557 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 DPH1Q9BZG8 443 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 C12orf65Q9H3J6 166 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 EHD1Q9H4M9 534 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 STARD5Q9NSY2 213 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 GEMIN8Q9NWZ8 242 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SENP1Q9P0U3 644 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 COPG2Q9UBF2 871 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 DHCR7Q9UBM7 475 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 PCTPQ9UKL6 214 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 ZMIZ1Q9ULJ6 1067 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 RUVBL1Q9Y265 456 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 TNPO3Q9Y5L0 923 aaKnown RBP6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 AP1M2Q9Y6Q5 423 aa6.66□□□□□ -1.34
LPCAT3-209ENST00000540060 SEC16AO15027 2179 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 PCSK5Q92824 1860 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 LOC101059948A0A1B0GTJ6 334 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 A0A1B0GX78 115 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 SRRM3A6NNA2 597 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 G3V2L1 256 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 MEN1O00255 615 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 CLGNO14967 610 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 DSCR3O14972 297 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 RGS16O15492 202 aaPredicted RBP6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 RRP8O43159 456 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 OR1F1O43749 312 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 TYROBPO43914 113 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 LCMT2O60294 686 aaKnown RBP6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 DLX3O60479 287 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 STATHP02808 62 aa6.65□□□□□ -1.34
LPCAT3-209ENST00000540060 EIF2S1P05198 315 aaKnown RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms