RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 SUSD1Q6UWL2 747 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 OTOAQ7RTW8 1153 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 LDB1Q86U70 411 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 LGI4Q8N135 537 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 CPSF7Q8N684 471 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 OR9A1PQ8NGU1 263 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 OR9A4Q8NGU2 314 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 OR51Q1Q8NH59 317 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 ANP32BQ92688 251 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF778Q96MU6 729 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 P2RY12Q9H244 342 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 GSX1Q9H4S2 264 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 CCM2LQ9NUG4 571 aaPredicted RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 RUVBL2Q9Y230 463 aaKnown RBP10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 RNF6Q9Y252 685 aa10.95□□□□□ -0.66
CLSTN3-209ENST00000539982 A0A1B0GTH9 108 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 OR2W5A6NFC9 320 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 P2RX6O15547 441 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 SLC25A12O75746 678 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 ZWINTO95229 277 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 NSA2O95478 260 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 TPM1P09493 284 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 CTNNA1P35221 906 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 CETN2P41208 172 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 TTPAP49638 278 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 TAS2R50P59544 299 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 ACTN3Q08043 901 aaPredicted RBP10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 ARHGAP19Q14CB8 494 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 ICE2Q659A1 982 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 PCGF5Q86SE9 256 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 RPS19BP1Q86WX3 136 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 LRRC6Q86X45 466 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 POGLUT1Q8NBL1 392 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 MCOLN3Q8TDD5 553 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 RND1Q92730 232 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 PEX13Q92968 403 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 CDCP1Q9H5V8 836 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 PCYOX1Q9UHG3 505 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 GNPTGQ9UJJ9 305 aa10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 R3HDM2Q9Y2K5 976 aaKnown RBP10.94□□□□□ -0.66
CLSTN3-209ENST00000539982 HEATR5BQ9P2D3 2071 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 TMEM200CA6NKL6 621 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 FAM90A27PA6NNH2 459 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 USP27XA6NNY8 438 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 ERI2A8K979 691 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 NDC80O14777 642 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CD3EAPO15446 510 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CCNDBP1O95273 360 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 RPS3P23396 243 aaKnown RBP eCLIP10.93□□□□□ -0.669e-7■■■□□ 18.6
CLSTN3-209ENST00000539982 DEKP35659 375 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 HSD17B2P37059 387 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 XCR1P46094 333 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CYB561P49447 251 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 SNRPNP63162 240 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 ABATP80404 500 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 MYBPHQ13203 477 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 SFT2D3Q587I9 215 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF468Q5VIY5 522 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 AADACL2Q6P093 401 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 PAPD4Q6PIY7 484 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CD163Q86VB7 1156 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CLYBLQ8N0X4 340 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 SHISA5Q8N114 240 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 PLPP5Q8NEB5 264 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 LPAR4Q99677 370 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 EBNA1BP2Q99848 306 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 TP63Q9H3D4 680 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 TRIM45Q9H8W5 580 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 DLL4Q9NR61 685 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 CATSPERZQ9NTU4 200 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 DNAJB12Q9NXW2 375 aaKnown RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 MARCH4Q9P2E8 410 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 TAC3Q9UHF0 121 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 RPH3AQ9Y2J0 694 aaPredicted RBP10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 ABCA4P78363 2273 aa10.93□□□□□ -0.66
CLSTN3-209ENST00000539982 KLRC4-KLRK1H3BQV0 150 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 MYO1CO00159 1063 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 HAT1O14929 419 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 TFECO14948 347 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 KLK8O60259 260 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PRMT3O60678 531 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 MFAP3LO75121 409 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 TPP2P29144 1249 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 ATP5DP30049 168 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 BCL6P41182 706 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 GRIA1P42261 906 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PNLIPRP1P54315 467 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 GDF10P55107 478 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 RWDD2BP57060 319 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 FOXD4Q12950 439 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 TSTA3Q13630 321 aaPredicted RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 USP10Q14694 798 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 NSDHLQ15738 373 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PPP1R21Q6ZMI0 780 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PRSS41Q7RTY9 318 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 ADCK2Q7Z695 626 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 ZNF227Q86WZ6 799 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 PLD3Q8IV08 490 aa10.92□□□□□ -0.66
CLSTN3-209ENST00000539982 CCDC71Q8IV32 467 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms