RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RETREG1Q9H6L5 497 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CSNK1G1Q9HCP0 422 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 DCAF13Q9NV06 445 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 RBM22Q9NW64 420 aaKnown RBP eCLIP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 DDIT4Q9NX09 232 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 CCDC59Q9P031 241 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SLC2A6Q9UGQ3 507 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 SLC6A14Q9UN76 642 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 TRAPPC4Q9Y296 219 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 WBP11Q9Y2W2 641 aaKnown RBP7.43□□□□□ -1.22
CCDC60-204ENST00000539847 FIS1Q9Y3D6 152 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 ANGPTL3Q9Y5C1 460 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PEX16Q9Y5Y5 336 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 COMMD10Q9Y6G5 202 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 PMF1-BGLAPU3KQ54 211 aa7.43□□□□□ -1.22
CCDC60-204ENST00000539847 LOC285095A0A1B0GVY8 99 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ELOVL7A1L3X0 281 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ANKRD34BA5PLL1 514 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 METTL15A6NJ78 407 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 YJEFN3A6XGL0 299 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 UPK3BL1B0FP48 263 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 UPK3BL2E5RIL1 263 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 I6L893 689 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PPEF2O14830 753 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 HAT1O14929 419 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 B4GAT1O43505 415 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 RGS10O43665 173 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 DFNA5O60443 496 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CRCPO75575 148 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 RPP40O75818 363 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ANGPTL1O95841 491 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 KRT8P05787 483 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 SERPINF2P08697 491 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 SLC2A3P11169 496 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 NCF1P14598 390 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF37AP17032 561 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CD6P30203 668 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 DCTP40126 519 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 MAGEA11P43364 429 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PPP3CCP48454 512 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PXNP49023 591 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TUFMP49411 452 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ARHGDIAP52565 204 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 DIO3P55073 304 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CDKN2DP55273 166 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ARPP19P56211 112 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 LILRA4P59901 499 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 UFM1P61960 85 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 BNC1Q01954 994 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 C19orf57Q0VDD7 668 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CLCA4Q14CN2 919 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PCSK7Q16549 785 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 GEN1Q17RS7 908 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TYSND1Q2T9J0 566 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PGS1Q32NB8 556 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ITPRIPL2Q3MIP1 535 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TMEM196Q5HYL7 178 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CCNJQ5T5M9 372 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 STPG1Q5TH74 334 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 AGAP6Q5VW22 663 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ZNF544Q6NX49 715 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 USP43Q70EL4 1123 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PAGE2Q7Z2X7 111 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PIWIL3Q7Z3Z3 882 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 SNX20Q7Z614 316 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CALHM3Q86XJ0 350 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PLD3Q8IV08 490 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 UMODL1-AS1Q8N2C9 162 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 FBXO39Q8N4B4 442 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PAF1Q8N7H5 531 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 OR7G1Q8NGA0 311 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 SPATA22Q8NHS9 363 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 MCFD2Q8NI22 146 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 MCOLN3Q8TDD5 553 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 C2orf15Q8WU43 125 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 NINJ1Q92982 152 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 RHBDF1Q96CC6 855 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PDLIM5Q96HC4 596 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PPP3R2Q96LZ3 170 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 AGAP4Q96P64 663 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PGLYRP2Q96PD5 576 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ZBTB18Q99592 522 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CCDC32Q9BV29 185 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TKTL2Q9H0I9 626 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 SMG9Q9H0W8 520 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ACTR8Q9H981 624 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 NEK6Q9HC98 313 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CCDC177Q9NQR7 707 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 DIABLOQ9NR28 239 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TMEFF2Q9UIK5 374 aaPredicted RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 POU2F3Q9UKI9 436 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 CDH9Q9ULB4 789 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 TNPO3Q9Y5L0 923 aaKnown RBP7.42□□□□□ -1.22
CCDC60-204ENST00000539847 NOX1Q9Y5S8 564 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 ANK1P16157 1881 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 PKD1L2Q7Z442 2459 aa7.42□□□□□ -1.22
CCDC60-204ENST00000539847 GREB1Q4ZG55 1949 aa7.41□□□□□ -1.22
CCDC60-204ENST00000539847 A0A075B6Q4 140 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms