RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ASIC5Q9NY37 505 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 HECAQ9UBI9 543 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 DOCK6Q96HP0 2047 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 UNC80Q8N2C7 3258 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CTDSP2O14595 271 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 OPN1SWP03999 348 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CKMP06732 381 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 EIF2DP41214 584 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NRIP1P48552 1158 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 PPP5CP53041 499 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 RPP38P78345 283 aaKnown RBP12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NOGQ13253 232 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NXNL2Q5VZ03 156 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CPZQ66K79 652 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 OR4F3Q6IEY1 312 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 METTL4Q8N3J2 472 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 GLB1L3Q8NCI6 653 aaPredicted RBP12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 MAL2Q969L2 176 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 HHIPL1Q96JK4 782 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 NEDD4LQ96PU5 975 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CENPOQ9BU64 300 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 HOXD1Q9GZZ0 328 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 SLC32A1Q9H598 525 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 CCL26Q9Y258 94 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 TPRKBQ9Y3C4 175 aa12.15□□□□□ -0.46
SFSWAP-208ENST00000539506 FAM47E-STBD1D6RA91 191 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 C1SP09871 688 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 NUDT7P0C024 238 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 SDC1P18827 310 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 AOAHP28039 575 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 RPS14P62263 151 aaKnown RBP12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 TAB1Q15750 504 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 SMU1Q2TAY7 513 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 ZNF621Q6ZSS3 439 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 USP43Q70EL4 1123 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 HTR3DQ70Z44 454 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 UBE2R2Q712K3 238 aaPredicted RBP12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 HORMAD1Q86X24 394 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 OR8H2Q8N162 312 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 PJA1Q8NG27 643 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 FIBINQ8TAL6 211 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 UTP15Q8TED0 518 aaKnown RBP12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 VMP1Q96GC9 406 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 ZNF486Q96H40 463 aaPredicted RBP12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 PYURFQ96I23 114 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 CTRCQ99895 268 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 PSD2Q9BQI7 771 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 KCTD5Q9NXV2 234 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 GPR83Q9NYM4 423 aa12.15□□□□□ -0.47
SFSWAP-208ENST00000539506 RGS5O15539 181 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 UPK1BO75841 260 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 IGSF6O95976 241 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ANXA5P08758 320 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ALOX5P09917 674 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 SERPINA4P29622 427 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 CLDN8P56748 225 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 MAD2L1Q13257 205 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 DDX39BQ13838 428 aaKnown RBP12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TPRG1LQ5T0D9 272 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 LRIF1Q5T3J3 769 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 LYPLAL1Q5VWZ2 237 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 DPY19L3Q6ZPD9 716 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TPRG1Q6ZUI0 275 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 GET4Q7L5D6 327 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 GDPD3Q7L5L3 318 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 CHCHD4Q8N4Q1 142 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 CHST14Q8NCH0 376 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 SELENOMQ8WWX9 145 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ASB11Q8WXH4 323 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 FOXJ1Q92949 421 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 COPS8Q99627 209 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TTYH2Q9BSA4 534 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 MRPL17Q9NRX2 175 aaKnown RBP12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 KRT84Q9NSB2 600 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ADPRHL2Q9NX46 363 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 SLC22A14Q9Y267 594 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 IGLV3-16A0A075B6K0 115 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TAF4O00268 1085 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ITPKAP23677 461 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ZNF404Q494X3 552 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TMC8Q8IU68 726 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TCAIMQ8N3R3 496 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 BEND7Q8N7W2 519 aaPredicted RBP12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 ZFYVE19Q96K21 471 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 SUV39H2Q9H5I1 410 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 RMND5AQ9H871 391 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 PARVBQ9HBI1 364 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TRIM39Q9HCM9 518 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 RAD18Q9NS91 495 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 TMEM184CQ9NVA4 438 aa12.14□□□□□ -0.47
SFSWAP-208ENST00000539506 A0A1W2PRU2 124 aa12.13□□□□□ -0.47
SFSWAP-208ENST00000539506 YY2O15391 372 aa12.13□□□□□ -0.47
SFSWAP-208ENST00000539506 TLL1O43897 1013 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms