RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 PRSS38A1L453 326 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 C7orf72A4D263 438 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 WASHC1A8K0Z3 465 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 NTRK1P04629 796 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 PRPH2P23942 346 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 ATG9BQ674R7 924 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 KIAA1161Q6NSJ0 714 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 TMIGD1Q6UXZ0 262 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 WASH2PQ6VEQ5 465 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 AMER3Q8N944 861 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 GLB1L3Q8NCI6 653 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 OR2T12Q8NG77 320 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 CHTF18Q8WVB6 975 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 UCN3Q969E3 161 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 CIDECQ96AQ7 238 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 RNF145Q96MT1 663 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 F2RL3Q96RI0 385 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 TPSD1Q9BZJ3 242 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 TRIT1Q9H3H1 467 aaKnown RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 SPHK1Q9NYA1 384 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 CYP8B1Q9UNU6 501 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 SLC17A4Q9Y2C5 497 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 IGKV1-8A0A0C4DH67 115 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 CACNB4O00305 520 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 SOCS2O14508 198 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 PI15O43692 258 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 SCN2BO60939 215 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 EEFSECP57772 596 aaKnown RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 FOLH1Q04609 750 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 AGERQ15109 404 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 NKG7Q16617 165 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 RUNDC3AQ59EK9 446 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 DGLUCYQ7Z3D6 616 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 CHCHD4Q8N4Q1 142 aa13.57□□□□□ -0.24
ACTN1-205ENST00000538545 RUVBL1Q9Y265 456 aaKnown RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
ACTN1-205ENST00000538545 NINQ8N4C6 2090 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 TRBV5-3A0A0A0MS03 114 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 PEX1O43933 1283 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 PLOD1Q02809 727 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 BNIP2Q12982 314 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 C17orf64Q86WR6 236 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 FAM129CQ86XR2 697 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 TICAM1Q8IUC6 712 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 OR52E1Q8NGJ3 308 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 CAMK1GQ96NX5 476 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 FCRL4Q96PJ5 515 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 NCKAP1Q9Y2A7 1128 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 FPGTO14772 594 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 RASGRP1O95267 797 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 NUDT7P0C024 238 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 PTGER1P34995 402 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 IST1P53990 364 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 CTBSQ01459 385 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 RPA4Q13156 261 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 LAPTM5Q13571 262 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 KLHDC8AQ8IYD2 350 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 ZNF548Q8NEK5 533 aaPredicted RBP13.56□□□□□ -0.24
ACTN1-205ENST00000538545 FAM131CQ96AQ9 280 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 TMED5Q9Y3A6 229 aa13.56□□□□□ -0.24
ACTN1-205ENST00000538545 CELA2BP08218 269 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 HTR1EP28566 365 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 TAS2R50P59544 299 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 GAS6Q14393 721 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 SMU1Q2TAY7 513 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 FBXL6Q8N531 539 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 NCLNQ969V3 563 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 ZUFSPQ96AP4 578 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 NSMCE2Q96MF7 247 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 GBP5Q96PP8 586 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 HHIPQ96QV1 700 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 EFCAB11Q9BUY7 163 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 KAT8Q9H7Z6 458 aaKnown RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 UBE2ZQ9H832 354 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 ACSL6Q9UKU0 697 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 OR1F1O43749 312 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 UQCRBP14927 111 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 PRPS1L1P21108 318 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 MAPK1P28482 360 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 SNRPNP63162 240 aaKnown RBP13.55□□□□□ -0.24
ACTN1-205ENST00000538545 PRKCQQ04759 706 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 GAB1Q13480 694 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 COL19A1Q14993 1142 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 TMEM154Q6P9G4 183 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 LAS2Q8IYD9 372 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 TMEM145Q8NBT3 493 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 OR4E2Q8NGC2 313 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 OR5AK3PQ8NH89 298 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 NETO1Q8TDF5 533 aa13.55□□□□□ -0.24
ACTN1-205ENST00000538545 TESCQ96BS2 214 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms