RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 KIAA0408Q6ZU52 694 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 PIWIL4Q7Z3Z4 852 aaKnown RBP8.19□□□□□ -1.1
DDB1-212ENST00000538470 VN1R4Q7Z5H5 301 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 GALNT7Q86SF2 657 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 LAPTM4BQ86VI4 370 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 C17orf64Q86WR6 236 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 TICAM1Q8IUC6 712 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 PALM2Q8IXS6 379 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 MYO1HQ8N1T3 1032 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 SIRT6Q8N6T7 355 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 CAMKVQ8NCB2 501 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 C2CD4AQ8NCU7 369 aaPredicted RBP8.19□□□□□ -1.1
DDB1-212ENST00000538470 SUN3Q8TAQ9 357 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 ACTRT1Q8TDG2 376 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 METTL21AQ8WXB1 218 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 SIGLEC10Q96LC7 697 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 CCDC138Q96M89 665 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 MESP1Q9BRJ9 268 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 NAT9Q9BTE0 207 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 TAS2R13Q9NYV9 303 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 STOX2Q9P2F5 926 aaPredicted RBP8.19□□□□□ -1.1
DDB1-212ENST00000538470 MKL2Q9ULH7 1088 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 CORO1CQ9ULV4 474 aaPredicted RBP8.19□□□□□ -1.1
DDB1-212ENST00000538470 PYCARDQ9ULZ3 195 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 OSGIN2Q9Y236 505 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 CRYBG3Q68DQ2 2970 aa8.19□□□□□ -1.1
DDB1-212ENST00000538470 OR5H15A6NDH6 313 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 PABPN1LA6NDY0 278 aaKnown RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 H7BY64 318 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 FFAR3O14843 346 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 GPR42O15529 346 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 LRRTM2O43300 516 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 JRKO75564 520 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 CRYABP02511 175 aaKnown RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 ITGAMP11215 1152 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 XCR1P46094 333 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 AP1S2P56377 157 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 SKP1P63208 163 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 CSNK1G2P78368 415 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 MPP1Q00013 466 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ZRSR2Q15696 482 aaKnown RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 EXT1Q16394 746 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 SYT16Q17RD7 645 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.18□□□□□ -1.13e-6■□□□□ 9.1
DDB1-212ENST00000538470 HSP90AA5PQ58FG0 334 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 SPANXN3Q5MJ09 141 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 RNASEH2BQ5TBB1 312 aaKnown RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 ABHD17BQ5VST6 288 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ZNF787Q6DD87 383 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 PLAG1Q6DJT9 500 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 NIPAL1Q6NVV3 410 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 HIBCHQ6NVY1 386 aaPredicted RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 LCTLQ6UWM7 567 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ASPGQ86U10 573 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 PLD3Q8IV08 490 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 CNTN4Q8IWV2 1026 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 AGGF1Q8N302 714 aaeCLIP8.18□□□□□ -1.1
DDB1-212ENST00000538470 CATSPER1Q8NEC5 780 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 OR9A4Q8NGU2 314 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 OR51Q1Q8NH59 317 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 DNAJB8Q8NHS0 232 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 IMMP1LQ96LU5 166 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 MAGEB10Q96LZ2 347 aaPredicted RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 PRAP1Q96NZ9 151 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 OR1F2PQ96R84 312 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 HAUS8Q9BT25 410 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 SARGQ9BW04 601 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 SGPP1Q9BX95 441 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 VN1R1Q9GZP7 353 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.18□□□□□ -1.1
DDB1-212ENST00000538470 PARVBQ9HBI1 364 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ANKHQ9HCJ1 492 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 IARS2Q9NSE4 1012 aaKnown RBP8.18□□□□□ -1.1
DDB1-212ENST00000538470 ABCF3Q9NUQ8 709 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 ABI3Q9P2A4 366 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 PDE10AQ9Y233 779 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 PCDHGB6Q9Y5F9 930 aa8.18□□□□□ -1.1
DDB1-212ENST00000538470 CELSR2Q9HCU4 2923 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 NCOA6Q14686 2063 aaPredicted RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 CACNA1CQ13936 2221 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 PCNX1Q96RV3 2341 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 USP27XA6NNY8 438 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 CDK2AP1O14519 115 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 DNALI1O14645 258 aaPredicted RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 PRAMEF2O60811 474 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 HAUS5O94927 633 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 RASAL1O95294 804 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 WDPCPO95876 746 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 ENO2P09104 434 aaPredicted RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 HIST1H2AGP0C0S8 130 aaPredicted RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 IL1RNP18510 177 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 HIST1H2ADP20671 130 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 BCL6P41182 706 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 EFNA3P52797 238 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 MAT1AQ00266 395 aaKnown RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 ZNF33BQ06732 778 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
DDB1-212ENST00000538470 HERC3Q15034 1050 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 PPP1R7Q15435 360 aa8.17□□□□□ -1.1
DDB1-212ENST00000538470 KCTD19Q17RG1 926 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms