RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 NOBOXO60393 691 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SCELO95171 688 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 C9P02748 559 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GP1BBP13224 206 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GDI2P50395 445 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 RAB28P51157 221 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 RAB14P61106 215 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 NFE2L1Q14494 772 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 NNATQ16517 81 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ZDHHC24Q6UX98 284 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TTLL10Q6ZVT0 673 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TDRPQ86YL5 185 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 NLGN4XQ8N0W4 816 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CHST4Q8NCG5 386 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 NAXEQ8NCW5 288 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 RBM15BQ8NDT2 890 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 OR7A2PQ8NGA2 310 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 C1GALT1C1Q96EU7 318 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PSKH2Q96QS6 385 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CLSTN3Q9BQT9 956 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PAIP1Q9H074 479 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 TMEM138Q9NPI0 162 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TVP23BQ9NYZ1 205 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 MYH7P12883 1935 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 A0A0U1RQS6 177 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TBX1O43435 398 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SYNGR4O95473 234 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CREB1P16220 341 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 C4BPBP20851 252 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 HSD11B1P28845 292 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GGT5P36269 586 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PTDSS1P48651 473 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 CDK9P50750 372 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 AFF1P51825 1210 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 PPP2R2BQ00005 443 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 ADGRE1Q14246 886 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TGFBIQ15582 683 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 FAM78AQ5JUQ0 283 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 THAP5Q7Z6K1 395 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PLXDC1Q8IUK5 500 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SLC30A8Q8IWU4 369 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CSNK1A1LQ8N752 337 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PROKR2Q8NFJ6 384 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 DCBLD2Q96PD2 775 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PDCD10Q9BUL8 212 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SLC46A2Q9BY10 475 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ACTL8Q9H568 366 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ZNF304Q9HCX3 659 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 VIRMAQ69YN4 1812 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 FAM25EA8MYX2 175 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ADAMDEC1O15204 470 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SCO2O43819 266 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ACADLP28330 430 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PPP3R1P63098 170 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ZNF33AQ06730 810 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CHAF1BQ13112 559 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 MADCAM1Q13477 382 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 DUOXA1Q1HG43 343 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CEACAM20Q6UY09 585 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 CCDC116Q8IYX3 515 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CLIP4Q8N3C7 705 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ARL10Q8N8L6 244 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 OR2L5Q8NG80 312 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 OR10Q1Q8NGQ4 319 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CEP295NLQ96MC4 621 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 FCRL3Q96P31 734 aaPredicted RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 TSGA13Q96PP4 275 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GAL3ST1Q99999 423 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 WDR77Q9BQA1 342 aaPredicted RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 EBF4Q9BQW3 602 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 COMMD4Q9H0A8 199 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 MVB12BQ9H7P6 319 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 FBRSQ9HAH7 460 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GPC6Q9Y625 555 aaPredicted RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 NRAPQ86VF7 1730 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TOGARAM1Q9Y4F4 1720 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TCHHQ07283 1943 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ARHGEF33A8MVX0 844 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CLIC1O00299 241 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ADAM12O43184 909 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 RSL1D1O76021 490 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 ITGBL1O95965 494 aaPredicted RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 AGR2O95994 175 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 CYB5AP00167 134 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 MTHFD1P11586 935 aaKnown RBP5.19□□□□□ -1.58
LRP6-203ENST00000538239 P2RY2P41231 377 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TBPL1P62380 186 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 OLR1P78380 273 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 DPYSQ14117 519 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 EMC10Q5UCC4 262 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 TMEM198Q66K66 360 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 ALG1LQ6GMV1 187 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 PSAPL1Q6NUJ1 521 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 C1orf94Q6P1W5 598 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 SLC2A7Q6PXP3 512 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 GALNTL5Q7Z4T8 443 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 UMODL1-AS1Q8N2C9 162 aa5.19□□□□□ -1.58
LRP6-203ENST00000538239 LMO3Q8TAP4 145 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms