RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
MKS1-204ENST00000537529 RAD51AP1Q96B01 352 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 ERLEC1Q96DZ1 483 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 YTHDF1Q9BYJ9 559 aaKnown RBP15.09■□□□□ 0.01
MKS1-204ENST00000537529 ZDHHC4Q9NPG8 344 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 AASDHPPTQ9NRN7 309 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 PTTG2Q9NZH5 202 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 LRRK1Q38SD2 2015 aa15.09■□□□□ 0.01
MKS1-204ENST00000537529 TRIM64CA6NLI5 447 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 GABRR3A8MPY1 467 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 CLIC3O95833 236 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 CDH15P55291 814 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 ZNF763Q0D2J5 394 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 PRAMEF14Q5SWL7 426 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 PRAMEF13Q5VWM6 474 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 NUDT18Q6ZVK8 323 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 ZNF551Q7Z340 670 aaPredicted RBP15.08■□□□□ 0.01
MKS1-204ENST00000537529 GPR155Q7Z3F1 870 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 LRRTM4Q86VH4 590 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 DCUN1D3Q8IWE4 304 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 OR5K1Q8NHB7 308 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 ZFP28Q8NHY6 868 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 NMD3Q96D46 503 aaKnown RBP15.08■□□□□ 0.01
MKS1-204ENST00000537529 COQ8BQ96D53 544 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 PHF12Q96QT6 1004 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 RBM4BQ9BQ04 359 aaKnown RBP15.08■□□□□ 0.01
MKS1-204ENST00000537529 RBM4Q9BWF3 364 aaKnown RBP15.08■□□□□ 0.01
MKS1-204ENST00000537529 RPS6KA6Q9UK32 745 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 UTS2RQ9UKP6 389 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 HCN2Q9UL51 889 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 DENND4AQ7Z401 1863 aa15.08■□□□□ 0.01
MKS1-204ENST00000537529 PDE4DIPQ5VU43 2346 aa15.08■□□□□ 0
MKS1-204ENST00000537529 TRIM64A6NGJ6 449 aa15.08■□□□□ 0
MKS1-204ENST00000537529 E2F6O75461 281 aa15.08■□□□□ 0
MKS1-204ENST00000537529 ZNF682O95780 498 aa15.08■□□□□ 0
MKS1-204ENST00000537529 RPN2P04844 631 aa15.08■□□□□ 0
MKS1-204ENST00000537529 APODP05090 189 aa15.08■□□□□ 0
MKS1-204ENST00000537529 IDSP22304 550 aa15.08■□□□□ 0
MKS1-204ENST00000537529 PIK3CBP42338 1070 aa15.08■□□□□ 0
MKS1-204ENST00000537529 CDK3Q00526 305 aa15.08■□□□□ 0
MKS1-204ENST00000537529 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.08■□□□□ 0
MKS1-204ENST00000537529 LRRC23Q53EV4 343 aaPredicted RBP15.08■□□□□ 0
MKS1-204ENST00000537529 LCTLQ6UWM7 567 aa15.08■□□□□ 0
MKS1-204ENST00000537529 B3GNT6Q6ZMB0 384 aa15.08■□□□□ 0
MKS1-204ENST00000537529 OSBPL10Q9BXB5 764 aa15.08■□□□□ 0
MKS1-204ENST00000537529 BHLHE41Q9C0J9 482 aaPredicted RBP15.08■□□□□ 0
MKS1-204ENST00000537529 IGFLR1Q9H665 355 aa15.08■□□□□ 0
MKS1-204ENST00000537529 SOX17Q9H6I2 414 aaPredicted RBP15.08■□□□□ 0
MKS1-204ENST00000537529 ATP6V1HQ9UI12 483 aa15.08■□□□□ 0
MKS1-204ENST00000537529 VPS4AQ9UN37 437 aa15.08■□□□□ 0
MKS1-204ENST00000537529 PRKAB1Q9Y478 270 aa15.08■□□□□ 0
MKS1-204ENST00000537529 STON1Q9Y6Q2 735 aa15.08■□□□□ 0
MKS1-204ENST00000537529 IGLON5A6NGN9 336 aa15.07■□□□□ 0
MKS1-204ENST00000537529 KCNK5O95279 499 aa15.07■□□□□ 0
MKS1-204ENST00000537529 DRD3P35462 400 aa15.07■□□□□ 0
MKS1-204ENST00000537529 RPL3P39023 403 aaKnown RBP15.07■□□□□ 0
MKS1-204ENST00000537529 MAGEA2P43356 314 aa15.07■□□□□ 0
MKS1-204ENST00000537529 BIRC2Q13490 618 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ZIK1Q3SY52 487 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 CCNYL2Q5T2Q4 361 aa15.07■□□□□ 0
MKS1-204ENST00000537529 SPESP1Q6UW49 350 aa15.07■□□□□ 0
MKS1-204ENST00000537529 COMMD6Q7Z4G1 85 aa15.07■□□□□ 0
MKS1-204ENST00000537529 R3HCC1LQ7Z5L2 792 aaKnown RBP15.07■□□□□ 0
MKS1-204ENST00000537529 OXR1Q8N573 874 aa15.07■□□□□ 0
MKS1-204ENST00000537529 REEP4Q9H6H4 257 aa15.07■□□□□ 0
MKS1-204ENST00000537529 TPT1P8Q9HAU6 139 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ATAD3AQ9NVI7 634 aa15.07■□□□□ 0
MKS1-204ENST00000537529 BTBD3Q9Y2F9 522 aa15.07■□□□□ 0
MKS1-204ENST00000537529 TSC22D4Q9Y3Q8 395 aa15.07■□□□□ 0
MKS1-204ENST00000537529 MAGED1Q9Y5V3 778 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 GMEB1Q9Y692 573 aa15.07■□□□□ 0
MKS1-204ENST00000537529 RNASET2O00584 256 aaKnown RBP15.07■□□□□ 0
MKS1-204ENST00000537529 MID1O15344 667 aa15.07■□□□□ 0
MKS1-204ENST00000537529 YY2O15391 372 aa15.07■□□□□ 0
MKS1-204ENST00000537529 PCDH8O95206 1070 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ADH1BP00325 375 aa15.07■□□□□ 0
MKS1-204ENST00000537529 IST1P53990 364 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ESRRGP62508 458 aa15.07■□□□□ 0
MKS1-204ENST00000537529 PPP2R2BQ00005 443 aa15.07■□□□□ 0
MKS1-204ENST00000537529 CST6Q15828 149 aa15.07■□□□□ 0
MKS1-204ENST00000537529 AGBL4Q5VU57 503 aa15.07■□□□□ 0
MKS1-204ENST00000537529 TTC23Q5W5X9 447 aa15.07■□□□□ 0
MKS1-204ENST00000537529 CWF19L1Q69YN2 538 aaKnown RBP15.07■□□□□ 0
MKS1-204ENST00000537529 PTOV1Q86YD1 416 aa15.07■□□□□ 0
MKS1-204ENST00000537529 HIPK1Q86Z02 1210 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ZDHHC21Q8IVQ6 265 aa15.07■□□□□ 0
MKS1-204ENST00000537529 KRT78Q8N1N4 520 aa15.07■□□□□ 0
MKS1-204ENST00000537529 LMNTD1Q8N9Z9 388 aa15.07■□□□□ 0
MKS1-204ENST00000537529 PJA1Q8NG27 643 aa15.07■□□□□ 0
MKS1-204ENST00000537529 OR4A15Q8NGL6 344 aa15.07■□□□□ 0
MKS1-204ENST00000537529 OR5AR1Q8NGP9 310 aa15.07■□□□□ 0
MKS1-204ENST00000537529 TFGQ92734 400 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 PLA2G2FQ9BZM2 168 aa15.07■□□□□ 0
MKS1-204ENST00000537529 RSPH9Q9H1X1 276 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 TOR3AQ9H497 397 aa15.07■□□□□ 0
MKS1-204ENST00000537529 SH3BP4Q9P0V3 963 aa15.07■□□□□ 0
MKS1-204ENST00000537529 ZNF282Q9UDV7 671 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 CEPT1Q9Y6K0 416 aa15.07■□□□□ 0
MKS1-204ENST00000537529 DNMT3AQ9Y6K1 912 aaPredicted RBP15.07■□□□□ 0
MKS1-204ENST00000537529 ATG2AQ2TAZ0 1938 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms