RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 CLCNKBP51801 687 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 HADHBP55084 474 aaKnown RBP10.36□□□□□ -0.75
CLIP1-209ENST00000537178 HERV-K104P61576 105 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 S100A12P80511 92 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 RIN1Q13671 783 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 CNPY1Q3B7I2 92 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 PRAMEF14Q5SWL7 426 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 PRAMEF13Q5VWM6 474 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 FRG2Q64ET8 278 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 SLC29A4Q7RTT9 530 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 ARMC5Q96C12 935 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 LRRC58Q96CX6 371 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 FRG2BQ96QU4 278 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 CYP2S1Q96SQ9 504 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 GPR88Q9GZN0 384 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 WDR26Q9H7D7 661 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 Q9N2J8 555 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 ZDHHC3Q9NYG2 299 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 DTLQ9NZJ0 730 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 OAZ3Q9UMX2 235 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 NDRG2Q9UN36 371 aaKnown RBP10.36□□□□□ -0.75
CLIP1-209ENST00000537178 IFT52Q9Y366 437 aa10.36□□□□□ -0.75
CLIP1-209ENST00000537178 NPIPA5E9PKD4 350 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OAZ2O95190 189 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 F8A1P23610 371 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 BMP8BP34820 402 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TAS2R43P59537 309 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PPIGQ13427 754 aaKnown RBP eCLIP10.35□□□□□ -0.752e-7■□□□□ 8.5
CLIP1-209ENST00000537178 ACSBG2Q5FVE4 666 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 LRRC70Q7Z2Q7 622 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 BMP8AQ7Z5Y6 402 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 NR4A3Q92570 626 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 RPL10LQ96L21 214 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 DGAT2Q96PD7 388 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PCDH10Q9P2E7 1040 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SEC14L4Q9UDX3 406 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 NPIPA1Q9UND3 350 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 M0R129 80 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 RPP14O95059 124 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ENGP17813 658 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 FPR1P21462 350 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ERP29P30040 261 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ARL2P36404 184 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ECM1Q16610 540 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 CARD16Q5EG05 197 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 NCEH1Q6PIU2 408 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ZNF709Q8N972 641 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SLC37A3Q8NCC5 494 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SEC14L1Q92503 715 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 NEDD4LQ96PU5 975 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 HAPLN3Q96S86 360 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SLC29A3Q9BZD2 475 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PCDHAC1Q9H158 963 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SLC32A1Q9H598 525 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TAS2R10Q9NYW0 307 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 A0A1W2PQ45 241 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 A0A1W2PQY0 241 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 HTR3EA5X5Y0 456 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 DISC1C4P0D8 188 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SCDO00767 359 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ARPC2O15144 300 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A9O60656 530 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 DUSP11O75319 330 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 INMTO95050 263 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A6P19224 532 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A1P22309 533 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A4P22310 534 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 AADACL4Q5VUY2 407 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ARSKQ6UWY0 536 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PIGWQ7Z7B1 504 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TMED4Q7Z7H5 227 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OR4K17Q8NGC6 315 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OR5J2Q8NH18 312 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 GRHL3Q8TE85 626 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 CANT1Q8WVQ1 401 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SMPDL3AQ92484 453 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TMEM203Q969S6 136 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 C12orf43Q96C57 262 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 BTBD1Q9H0C5 482 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OR10A4Q9H209 315 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A7Q9HAW7 530 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A10Q9HAW8 530 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 UGT1A8Q9HAW9 530 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 SLC7A8Q9UHI5 535 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ASB3Q9Y575 518 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 FAM170BA6NMN3 283 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 GPR25O00155 361 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TREHO43280 583 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 ERI3O43414 337 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 AHSA1O95433 338 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 GJA1P17302 382 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 MAN2A2P49641 1150 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 CDK6Q00534 326 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TRMT10BQ6PF06 316 aaKnown RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 PAQR3Q6TCH7 311 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 TMCO2Q7Z6W1 182 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-209ENST00000537178 OR6N1Q8NGY5 312 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 BPIFB1Q8TDL5 484 aa10.35□□□□□ -0.75
CLIP1-209ENST00000537178 NUS1Q96E22 293 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms