RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 CTSBP07858 339 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 PRKAR1AP10644 381 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 KRT4P19013 534 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 PIK3CGP48736 1102 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 VSX2P58304 361 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 CSNK1G2P78368 415 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 CDC20Q12834 499 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 TBR1Q16650 682 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 FAM214AQ32MH5 1076 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 C18orf21Q32NC0 220 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 CRTC2Q53ET0 693 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 BEND6Q5SZJ8 279 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 NXPE4Q6UWF7 544 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 LRIG3Q6UXM1 1119 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 DSELQ8IZU8 1212 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 IQCKQ8N0W5 287 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 MYRIPQ8NFW9 859 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 OR4K1Q8NGD4 311 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 EXTL1Q92935 676 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 MR1Q95460 341 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF285Q96NJ3 590 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 SARGQ9BW04 601 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 SPRTNQ9H040 489 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 IQCGQ9H095 443 aaKnown RBP12.93□□□□□ -0.34
RPAIN-205ENST00000536255 CHST8Q9H2A9 424 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 ACTL8Q9H568 366 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 TXLNGQ9NUQ3 528 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 SENP1Q9P0U3 644 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 GRID1Q9ULK0 1009 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 SH2B3Q9UQQ2 575 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 ANGPTL3Q9Y5C1 460 aa12.93□□□□□ -0.34
RPAIN-205ENST00000536255 TRBC2A0A5B9 178 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 EIF4E1BA6NMX2 242 aaKnown RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 H0YGG7 62 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 RGS16O15492 202 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 NRP2O60462 931 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 EIF2S1P05198 315 aaKnown RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 EPB42P16452 691 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 AGXTP21549 392 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CRHR1P34998 444 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 AGTR2P50052 363 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 ARF3P61204 181 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 RPS15P62841 145 aaKnown RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 SLC18A2Q05940 514 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF844Q08AG5 666 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 PCBP2Q15366 365 aaKnown RBP eCLIP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 LINC00303Q3SY05 128 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CCDC153Q494R4 210 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 FBXO48Q5FWF7 155 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 WASHC2DQ5SRD0 308 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CATSPEREQ5SY80 951 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CEP85LQ5SZL2 805 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 ATG9BQ674R7 924 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 FRMPD2BQ6IN97 320 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 RHBDD2Q6NTF9 364 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 C16orf46Q6P387 395 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 SH2D5Q6ZV89 423 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 TRABD2AQ86V40 505 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 SLC22A9Q8IVM8 553 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 KRT78Q8N1N4 520 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CSNK1A1LQ8N752 337 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 PTGR2Q8N8N7 351 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 PROKR1Q8TCW9 393 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 ESAMQ96AP7 390 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 PHF21BQ96EK2 531 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 CATSPER2Q96P56 530 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 OR2A5Q96R48 311 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 RUFY1Q96T51 708 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 DPH2Q9BQC3 489 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 GPR87Q9BY21 358 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 FAM117AQ9C073 453 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 PITHD1Q9GZP4 211 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-205ENST00000536255 EHD1Q9H4M9 534 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 TMEM216Q9P0N5 145 aa12.92□□□□□ -0.34
RPAIN-205ENST00000536255 LOC105369274A0A096LPK9 316 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 LOC102723532A0A0G2JNH3 316 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 FITM1A5D6W6 292 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 OR1F1O43749 312 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 CREG1O75629 220 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 SLC35G6P0C7Q6 338 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 MYZAPP0CAP1 466 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 C1GALT1C1LP0DN25 315 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 ATP5F1P24539 256 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-205ENST00000536255 GSTM2P28161 218 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 PTPN4P29074 926 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 EMP3P54852 163 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 NFKB2Q00653 900 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 REEP5Q00765 189 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 IRF8Q02556 426 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 LAPTM5Q13571 262 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 LY6DQ14210 128 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 MUM1Q2TAK8 710 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 XKR6Q5GH73 641 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 PAGE2BQ5JRK9 111 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 ATP1A1-AS1Q5TC04 95 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
RPAIN-205ENST00000536255 ZNF385CQ66K41 422 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-205ENST00000536255 LCN10Q6JVE6 187 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms