RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ACOX2Q99424 681 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 SLC30A2Q9BRI3 323 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 OR51E2Q9H255 320 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CARS2Q9HA77 564 aaKnown RBP13.55□□□□□ -0.24
LIG1-203ENST00000536218 ZNF556Q9HAH1 456 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 SLC23A1Q9UHI7 598 aa13.55□□□□□ -0.24
LIG1-203ENST00000536218 CLDN24A6NM45 220 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 ALPIP09923 528 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 CR2P20023 1033 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 CYP4F2P78329 520 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 TIAL1Q01085 375 aaKnown RBP eCLIP13.54□□□□□ -0.24
LIG1-203ENST00000536218 BNC1Q01954 994 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 CYP4F3Q08477 520 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 PSAPL1Q6NUJ1 521 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 TMEM179BQ7Z7N9 219 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 PTGR2Q8N8N7 351 aaPredicted RBP13.54□□□□□ -0.24
LIG1-203ENST00000536218 OR4M2Q8NGB6 313 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 LHFPL5Q8TAF8 219 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 MCCC2Q9HCC0 563 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 DNAJB9Q9UBS3 223 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 CLEC4EQ9ULY5 219 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 KCNE2Q9Y6J6 123 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 ARPC4-TTLL3A0A0A6YYG9 625 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 TYW5A2RUC4 315 aaKnown RBP13.54□□□□□ -0.24
LIG1-203ENST00000536218 TULP3O75386 442 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 CLTBP09497 229 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 MYL9P24844 172 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 MC4RP32245 332 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 ATP4BP51164 291 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 OR4D1Q15615 310 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 BLOC1S3Q6QNY0 202 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 ARSKQ6UWY0 536 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 MYOCQ99972 504 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 DUSP21Q9H596 190 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 MID1IP1Q9NPA3 183 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 WASH6PQ9NQA3 447 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 GMPPBQ9Y5P6 360 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 DNAJC15Q9Y5T4 150 aa13.54□□□□□ -0.24
LIG1-203ENST00000536218 A0A1W2PP18 115 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 IQCF5A8MTL0 148 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 SMAD6O43541 496 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 F11P03951 625 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 PFKLP17858 780 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 LPOP22079 712 aaPredicted RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 ZNF140P52738 457 aaPredicted RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 FOXA1P55317 472 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 SCIMPQ6UWF3 145 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 KBTBD8Q8NFY9 601 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 ESAMQ96AP7 390 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 GPR21Q99679 349 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIG1-203ENST00000536218 NLE1Q9NVX2 485 aaPredicted RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 MUTYHQ9UIF7 546 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 A0A1W2PRU2 124 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 OR2A25A4D2G3 310 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 CNPP09543 421 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 ADORA3P0DMS8 318 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 CD1DP15813 335 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 FDXRP22570 491 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 EEFSECP57772 596 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 DNAJB13P59910 316 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 ACVR1Q04771 509 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 FADDQ13158 208 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 TAF1AQ15573 450 aaPredicted RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 TIGD6Q17RP2 521 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 GAREM2Q75VX8 874 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 CHST9Q7L1S5 443 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 TWIST2Q8WVJ9 160 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 TOX2Q96NM4 488 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 NSUN5Q96P11 429 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 AARSD1Q9BTE6 412 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 ADGRE3Q9BY15 652 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 GPR63Q9BZJ6 419 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 ACTR8Q9H981 624 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 MAGEL2Q9UJ55 1249 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 DOCK6Q96HP0 2047 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 SUPT3HB4E1H0 165 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 NIPSNAP2O75323 286 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 CRCPO75575 148 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 PRSS23O95084 383 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 LBPP18428 481 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 TNNI3P19429 210 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 RYKP34925 604 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 GRK5P34947 590 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 SOX6P35712 828 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
LIG1-203ENST00000536218 GALEQ14376 348 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 NKG7Q16617 165 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 IGSF11Q5DX21 431 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 GARNL3Q5VVW2 1013 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 ALG1LQ6GMV1 187 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 SETD9Q8NE22 299 aa13.53□□□□□ -0.24
LIG1-203ENST00000536218 A0A096LPI6 279 aa13.52□□□□□ -0.24
LIG1-203ENST00000536218 TGM5O43548 720 aa13.52□□□□□ -0.24
LIG1-203ENST00000536218 IGFBP5P24593 272 aa13.52□□□□□ -0.24
LIG1-203ENST00000536218 HTR1EP28566 365 aa13.52□□□□□ -0.24
LIG1-203ENST00000536218 C21orf33P30042 268 aaPredicted RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms