RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ERVK-21P61565 698 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 RPS13P62277 151 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 PPP2R2BQ00005 443 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 CNTN1Q12860 1018 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 MYBPC3Q14896 1274 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GPR107Q5VW38 600 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 CES5AQ6NT32 575 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 VITQ6UXI7 678 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 FAM83HQ6ZRV2 1179 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF621Q6ZSS3 439 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 PJA1Q8NG27 643 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 OR9A1PQ8NGU1 263 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 LINC00615Q96LM1 132 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 PRM3Q9NNZ6 103 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 DENND4AQ7Z401 1863 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 KIF26AQ9ULI4 1882 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 C17orf113A0A1B0GUU1 675 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 EVPLLA8MZ36 301 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 ANXA4P09525 319 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 ACADLP28330 430 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 POLR2IP36954 125 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 HNRNPFP52597 415 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 C21orf58P58505 322 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 TAP2Q03519 686 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GRSF1Q12849 480 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GTF2H3Q13889 308 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 NEDD8Q15843 81 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 HKDC1Q2TB90 917 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 RBM48Q5RL73 367 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 MED27Q6P2C8 311 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 CACUL1Q86Y37 369 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 LRRC56Q8IYG6 542 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 C8orf59Q8N0T1 100 aaPredicted RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 OR2L2Q8NH16 312 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 POP5Q969H6 163 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 SH3KBP1Q96B97 665 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 METTL2AQ96IZ6 378 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 RBM4BQ9BQ04 359 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 DCUN1D5Q9BTE7 237 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 RBM4Q9BWF3 364 aaKnown RBP12.89□□□□□ -0.35
VPS33B-202ENST00000535906 SGPP1Q9BX95 441 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 AASDHPPTQ9NRN7 309 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 FAM118AQ9NWS6 357 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 TMEM9Q9P0T7 183 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GPR34Q9UPC5 381 aa12.89□□□□□ -0.35
VPS33B-202ENST00000535906 GNGT2O14610 69 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 SCAMP2O15127 329 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 B4GAT1O43505 415 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 MYO1DO94832 1006 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 JUNBP17275 347 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 HOXB6P17509 224 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 IL1RNP18510 177 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 STT3AP46977 705 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 MEF2AQ02078 507 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 BROXQ5VW32 411 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 SERPINA11Q86U17 422 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ADHFE1Q8IWW8 467 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 DRAXINQ8NBI3 349 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 CHFRQ96EP1 664 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF514Q96K75 400 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 DUSP26Q9BV47 211 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ZDHHC5Q9C0B5 715 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 SPNS1Q9H2V7 528 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 FAM120CQ9NX05 1096 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 YBX2Q9Y2T7 364 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 KCNK5O95279 499 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 GPX2P18283 190 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 CRHBPP24387 322 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 GJA4P35212 333 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 SLBPQ14493 270 aaKnown RBP eCLIP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 PDGFRLQ15198 375 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 SPIN4Q56A73 249 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 PIP5KL1Q5T9C9 394 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 EGFLAMQ63HQ2 1017 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 TMEM26Q6ZUK4 368 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 GPR155Q7Z3F1 870 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 TMEM179BQ7Z7N9 219 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 CROCCP3Q8IVE0 287 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF555Q8NEP9 628 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 HDAC2Q92769 488 aaKnown RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 PYURFQ96I23 114 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 MBOAT4Q96T53 435 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 DPEP2Q9H4A9 486 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 TRPV4Q9HBA0 871 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 PREBQ9HCU5 417 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
VPS33B-202ENST00000535906 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-202ENST00000535906 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 A0A0J9YVX5 310 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms