RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 C17orf62Q9BQA9 187 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 PARD6BQ9BYG5 372 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 CD244Q9BZW8 370 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 GPRC5BQ9NZH0 403 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 IFT80Q9P2H3 777 aaPredicted RBP21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 CHD6Q8TD26 2715 aa21.66■■□□□ 1.06
SFSWAP-204ENST00000535399 TXNDC9O14530 226 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 KLK8O60259 260 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 PRAMEF4O60810 478 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 RECKO95980 971 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 PRKAR1AP10644 381 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 GNAZP19086 355 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 SNRPNP63162 240 aaKnown RBP21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 CDC20Q12834 499 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 TSNAXIP1Q2TAA8 658 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 ATP1A1-AS1Q5TC04 95 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 PRAMEF9Q5VWM5 478 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 EMBQ6PCB8 327 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 LRRC70Q7Z2Q7 622 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 TDRPQ86YL5 185 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 METTL27Q8N6F8 245 aaPredicted RBP21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 CAVIN3Q969G5 261 aa21.65■■□□□ 1.06
SFSWAP-204ENST00000535399 CACNA1GO43497 2377 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 OR1F1O43749 312 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 CNOT3O75175 753 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 RBP1P09455 135 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 FURINP09958 794 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 ATXN8OSP0DMR3 200 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 C1GALT1C1LP0DN25 315 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 EPORP19235 508 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 VARSP26640 1264 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 SCTRP47872 440 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 OR1D4P47884 311 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 SLC9A5Q14940 896 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 FAM69BQ5VUD6 431 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 MLIPQ5VWP3 458 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 ATG9BQ674R7 924 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 MRPL14Q6P1L8 145 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 PRMT9Q6P2P2 845 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 C16orf46Q6P387 395 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 SYVN1Q86TM6 617 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 ASPGQ86U10 573 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 CNPY4Q8N129 248 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 SNX31Q8N9S9 440 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 TTC9Q92623 222 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 MACROD1Q9BQ69 325 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 AIF1LQ9BQI0 150 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 CAPS2Q9BXY5 557 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 PPCSQ9HAB8 311 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 XPR1Q9UBH6 696 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 TBK1Q9UHD2 729 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 RAB21Q9UL25 225 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 TCFL5Q9UL49 500 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 MRPS2Q9Y399 296 aaKnown RBP21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 NBEAQ8NFP9 2946 aa21.64■■□□□ 1.05
SFSWAP-204ENST00000535399 CCNT2O60583 730 aaKnown RBP21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 SLCO1A2P46721 670 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 RHDQ02161 417 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 ERV3-1Q14264 604 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 NAA30Q147X3 362 aaPredicted RBP21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 SETDB1Q15047 1291 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 RASA2Q15283 850 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 PDK4Q16654 411 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 PFKFB4Q16877 469 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 OVCH1Q7RTY7 1134 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 TBC1D19Q8N5T2 526 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 CAMKVQ8NCB2 501 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 SLC13A3Q8WWT9 602 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 FKBP10Q96AY3 582 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 SCYL1Q96KG9 808 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 GEMIN8Q9NWZ8 242 aaKnown RBP21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 GPN3Q9UHW5 284 aaPredicted RBP21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 MAU2Q9Y6X3 613 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 FER1L5A0AVI2 2057 aa21.63■■□□□ 1.05
SFSWAP-204ENST00000535399 K7EPI3 171 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 FOXS1O43638 330 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 KLF7O75840 302 aaPredicted RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 PIM1P11309 404 aaPredicted RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 GFAPP14136 432 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 ALDH18A1P54886 795 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 IL10RAQ13651 578 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 TMEM214Q6NUQ4 689 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 CYP4X1Q8N118 509 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 ANKRD53Q8N9V6 530 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 ACMSDQ8TDX5 336 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 EPS8L3Q8TE67 593 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 MVB12AQ96EY5 273 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 MRPL57Q9BQC6 102 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 EHD1Q9H4M9 534 aa21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 CPSF2Q9P2I0 782 aaKnown RBP21.62■■□□□ 1.05
SFSWAP-204ENST00000535399 LRRC14BA6NHZ5 514 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 SMIM23A6NLE4 172 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 CLGNO14967 610 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 H2AFYO75367 372 aaKnown RBP21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 ALBP02768 609 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 NUDT17P0C025 328 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 AHRP35869 848 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 FOXL2P58012 376 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 FAM53BQ14153 422 aa21.61■■□□□ 1.05
SFSWAP-204ENST00000535399 SLBPQ14493 270 aaKnown RBP eCLIP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms