RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DCUN1D3Q8IWE4 304 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 JAGN1Q8N5M9 183 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 UCK2Q9BZX2 261 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 TTYH3Q9C0H2 523 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 PCDHAC1Q9H158 963 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ACTL8Q9H568 366 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF224Q9NZL3 707 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 CYTH4Q9UIA0 394 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 EI24O14681 340 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 IFNA21P01568 189 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 CCNOP22674 350 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 GRK5P34947 590 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 MLLT6P55198 1093 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 DCAF4L2Q8NA75 395 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 RAB2BQ8WUD1 216 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 WRAP73Q9P2S5 460 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 GALPQ9UBC7 116 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 EIF1AYO14602 144 aaKnown RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 INMTO95050 263 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 GRIA1P42261 906 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 OR4F6Q8NGB9 312 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ZNF461Q8TAF7 563 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 POF1BQ8WVV4 589 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 ERMAPQ96PL5 475 aaPredicted RBP17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 TM9SF2Q99805 663 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 GLS2Q9UI32 602 aa17.65■□□□□ 0.42
SFSWAP-203ENST00000535236 FAM221BA6H8Z2 402 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 AGPSO00116 658 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 ITGB1P05556 798 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 MS4A13Q5J8X5 152 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 AGTRAPQ6RW13 159 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 PIM3Q86V86 326 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 MARCH9Q86YJ5 346 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC35B2Q8TB61 432 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 KCNH6Q9H252 994 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 SLC2A6Q9UGQ3 507 aa17.64■□□□□ 0.42
SFSWAP-203ENST00000535236 PLOD2O00469 737 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 SOD2P04179 222 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 KCNE1P15382 129 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 PON3Q15166 354 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 KHDC1Q4VXA5 237 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 ARL9Q6T311 187 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 AMBNQ9NP70 447 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MRC1P22897 1456 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 NUAK1O60285 661 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 TSPAN9O75954 239 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 PSKH1P11801 424 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 FUT4P22083 530 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 SYT16Q17RD7 645 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 LY6G5CQ5SRR4 150 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 TMEM198Q66K66 360 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 SMG9Q9H0W8 520 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 METTL8Q9H825 291 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 GRHPRQ9UBQ7 328 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 ARHGEF28Q8N1W1 1705 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 OR2AT4A6NND4 320 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 HCKP08631 526 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MECP2P51608 486 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MAZP56270 477 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 OR9A1PQ8NGU1 263 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 AIFM2Q9BRQ8 373 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MINDY3Q9H8M7 445 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 BAIAP2Q9UQB8 552 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MTMR11A4FU01 709 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 ARPC2O15144 300 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 MATN1P21941 496 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 DGKQP52824 942 aa17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 RPS13P62277 151 aaKnown RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 CMASQ8NFW8 434 aaPredicted RBP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.64■□□□□ 0.41
SFSWAP-203ENST00000535236 CD36P16671 472 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 RBM34P42696 430 aaKnown RBP17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 MR1Q95460 341 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TWNKQ96RR1 684 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 CMKLR1Q99788 373 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 FAM83CQ9BQN1 747 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 MED11Q9P086 117 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 CAMTA1Q9Y6Y1 1673 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 GRXCR1A8MXD5 290 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 BLOC1S5-TXNDC5H3BN57 136 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 DUSP3P51452 185 aaPredicted RBP17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 ELOCQ15369 112 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 ALG10Q5BKT4 473 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TMPRSS9Q7Z410 1059 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 ZNF565Q8N9K5 539 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TRPV4Q9HBA0 871 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 GIN1Q9NXP7 522 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 FHP07954 510 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 S100A1P23297 94 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 SELENOVP59797 346 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 ARPC4P59998 168 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 MERTKQ12866 999 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 PTCHD3Q3KNS1 767 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 SCGB2B2Q4G0G5 96 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 C1orf94Q6P1W5 598 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 NAXEQ8NCW5 288 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 CD180Q99467 661 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 OR51B5Q9H339 312 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 TRIM36Q9NQ86 728 aa17.63■□□□□ 0.41
SFSWAP-203ENST00000535236 DZANK1Q9NVP4 752 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms